Table 2 Summary of collected samples and reads quality for WGBS
Scientific name | Sample ID | Organ | Clean base (G) | Mapping rate(%) | SRA accessions |
|---|---|---|---|---|---|
Ailurus fulgens | afu_0601 | Liver | 119G | 70.4% | SRR18502788 |
Ailurus fulgens | afu_1219 | Liver | 136G | 76.6% | SRR18502787 |
Ailurus fulgens | afu_0429 | Liver | 126G | 73.4% | SRR18502783 |
Ailurus fulgens | afu_0527 | Liver | 123G | 77.7% | SRR18502782 |
Ailurus fulgens | afu_0601 | Pancreas | 220G | 74.6% | SRR18502781 |
Ailurus fulgens | afu_0527 | Pancreas | 123G | 79.3% | SRR18502780 |
Ailurus fulgens | afu_0708 | Pancreas | 129G | 75.2% | SRR18502779 |
Ailuropoda melanoleuca | aml_CC | Liver | 138G | 75.7% | SRR13334621 |
Ailuropoda melanoleuca | aml_DN | Liver | 129G | 77.4% | SRR13286861 |
Ailuropoda melanoleuca | aml_HT | Liver | 125G | 65.2% | SRR13334613 |
Ailuropoda melanoleuca | aml_PP | Liver | 118G | 76.7% | SRR13334611 |
Ailuropoda melanoleuca | aml_YS | Liver | 131G | 70.9% | SRR13334610 |
Ailuropoda melanoleuca | aml_CC | Pancreas | 138G | 73.7% | SRR13334620 |
Ailuropoda melanoleuca | aml_DN | Pancreas | 119G | 71.4% | SRR13334617 |
Ailuropoda melanoleuca | aml_HT | Pancreas | 130G | 73.1% | SRR13334612 |
Ailuropoda melanoleuca | aml_SE | Pancreas | 111G | 75.0% | SRR13286860 |
Ailuropoda melanoleuca | aml_YS | Pancreas | 135G | 71.1% | SRR13334609 |
Homo sapiens | has_01 | Liver | 135G | 63.2% | SRR10165496-SRR10165503 |
Homo sapiens | has_02 | Liver | 145G | 61.1% | SRR10165528-SRR10165535 |
Homo sapiens | has_03 | Liver | 114G | 61.9% | SRR10165698-SRR10165705 |
Homo sapiens | has_04 | Pancreas | 251G | 76.4% | SRR8659897 |
Homo sapiens | has_05 | Pancreas | 211G | 74.5% | SRR8659930 |
Mus musculus | mmu_01 | Liver | 109G | 75.4% | SRR1534676 |
Mus musculus | mmu_02 | Liver | 135G | 76.3% | SRR1534678 |