Stoddard FL: Survey of starch particle-size distribution in wheat and related species. Cereal Chem. 1999, 76: 145-149. 10.1094/CCHEM.1999.76.1.145.
Article
CAS
Google Scholar
Davies EJ, Tetlow IJ, Bowsher CG, Emes MJ: Molecular and biochemical characterization of cytosolic phosphoglucomutase in wheat endosperm (Triticum aestivum L. cv. Axona). J Exp Bot. 2003, 54: 1351-1360. 10.1093/jxb/erg151.
Article
CAS
PubMed
Google Scholar
Laudencia-Chingcuanco DL, Stamova BS, You FM, Lazo GR, Beckles DM, Anderson OD: Transcriptional profiling of wheat caryopsis development using cDNA microarrays. Plant Mol Biol. 2007, 63: 651-668. 10.1007/s11103-006-9114-y.
Article
CAS
PubMed
Google Scholar
Audic S, Claverie JM: The significance of digital gene expression profiles. Genome Res. 1997, 7: 986-995.
CAS
PubMed
Google Scholar
Schaffer R, Landgraf J, Pérez-Amador M, Wisman E: Monitoring genome-wide expression in plants. Curr Opin Biotech. 2000, 11: 162-167. 10.1016/S0958-1669(00)00084-7.
Article
CAS
PubMed
Google Scholar
Gregersen PL, Brinch-Pedersen H, Holm PB: A microarray- based comparative analysis of gene expression profiles during grain development in transgenic and wild type wheat. Transgenic Res. 2005, 14: 887-905. 10.1007/s11248-005-1526-y.
Article
CAS
PubMed
Google Scholar
Zhu T, Budworth P, Chen W, Provart N, Chang HS, Guimil S, Su W, Estes B, Zou G, Wang X: Transcriptional control of nutrient partitioning during rice grain filling. Plant Biotechnol J. 2003, 1: 59-70.
Article
CAS
PubMed
Google Scholar
Close TJ, Wanamaker SI, Caldo RA, Turner SM, Ashlock DA, Dickerson JA, Wing RA, Muehlbauer GJ, Kleinhofs A, Wise RP: A new resource for cereal genomics: 22 K barley GeneChip comes of age. Plant Physiol. 2004, 134: 960-968. 10.1104/pp.103.034462.
Article
CAS
PubMed
PubMed Central
Google Scholar
Clarke B, Rahman S: A microarray analysis of wheat grain hardness. Theor Appl Genet. 2005, 110: 1259-1267. 10.1007/s00122-005-1962-3.
Article
CAS
PubMed
Google Scholar
Wilson ID, Barker GLA, Lu C, Coghill JA, Beswick RW, Lenton JR, Edwards KJ: Alteration of the embryo transcriptome of hexaploid winter wheat (Triticum aestivum cv. Mercia) during maturation and germination. Funct Integr Genomic. 2005, 5: 144-154. 10.1007/s10142-005-0137-2.
Article
Google Scholar
Wan Y, Poole RL, Huttly AK, Toscano-Underwood C, Feeney K, Welham S, Gooding MJ, Mills C, Edwards KJ, Shewry PR, Mitchell RAC: Transcriptome analysis of grain development in hexaploid wheat. BMC Genomics. 2008, 9: 121-10.1186/1471-2164-9-121.
Article
PubMed
PubMed Central
Google Scholar
Pontius J, Wagner L, Schuler GD: UniGene, a unified view of the transcriptome. The NCBI Handbook National Center for Biotechnology Information. 2002, Bethesda, MD, USA
Google Scholar
Siegel S: Nonparametric Statistics for the Behavioral Sciences. 1956, New York: McGraw Hill Press
Google Scholar
Liu FJ, Jin SH, Li N, Liu X, Wang HY, Li JY: Comparative and Functional Analysis of Testis-Specific Genes. Biol Pharm Bull. 2011, 34: 28-35. 10.1248/bpb.34.28.
Article
CAS
PubMed
Google Scholar
Scheurle D, DeYoung MP, Binninger DM, Page H, Jahanzeb M, Narayanan R: Cancer gene discovery using digital differential display. Cancer Res. 2000, 60: 4037-4043.
CAS
PubMed
Google Scholar
Eujayl I, Morris C: Identification of differentially expressed UniGenes in developing wheat seed using Digital Differential Display. J Cereal Sci. 2009, 49: 316-318. 10.1016/j.jcs.2008.11.003.
Article
CAS
Google Scholar
Ogihara Y, Mochida K, Nemoto Y, Murai K, Yamazaki Y, Shin-I T, Kohara Y: Correlated clustering and virtual display of gene expression patterns in the wheat life cycle by large-scale statistical analyses of expressed sequence tags. Plant J. 2003, 33: 1001-1011. 10.1046/j.1365-313X.2003.01687.x.
Article
PubMed
Google Scholar
Schreiber AW, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer GJ, Druka A, Waugh R, Wise RP, Langridge P, Baumann U: Comparative transcriptomics in the Triticeae. BMC Genomics. 2009, 10: 285-10.1186/1471-2164-10-285.
Article
PubMed
PubMed Central
Google Scholar
Wise RP, Caldo RA, Hong L, Shen L, Cannon EK, Dickerson JA: BarleyBase/PLEXdb: A Unified Expression Profiling Database for Plants and Plant Pathogens. Plant Bioinformatic-Methods and Protocols. Volume 406. Edited by: Edwards D. 2007, Totowa, NJ: Humana Press, 347-363.
Google Scholar
Reich M, Liefeld T, Gould J, Lerner J, Tamayo P, Mesirov JP: GenePattern 2.0. Nat Genet. 2006, 38: 500-501. 10.1038/ng0506-500.
Article
CAS
PubMed
Google Scholar
Zheng Q, Wang XJ: GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis. Nucleic Acids Res. 2008, 36: 358-363. 10.1093/nar/gkn276.
Article
Google Scholar
Chojecki AJS, Bayliss MW, Gale MD: Cell production and DNA accumulation in the wheat endosperm, and their association with grain weight. Ann Bot. 1986, 58: 809-817.
Google Scholar
Becerra C, Puigdomenech P, Vicient CM: Computational and experimental analysis identifies Arabidopsis genes specifically expressed during early seed development. BMC Genomics. 2006, 7: 38-10.1186/1471-2164-7-38.
Article
PubMed
PubMed Central
Google Scholar
Roberts TH, Marttila S, Rasmussen SK, Hejgaard J: Differential gene expression for suicide-substrate serine proteinase inhibitors (serpins) in vegetative and grain tissues of barley. J Exp Bot. 2003, 54: 2251-2263. 10.1093/jxb/erg248.
Article
CAS
PubMed
Google Scholar
Habib H, Fazili KM: Plant protease inhibitors: a defense strategy in plants. Biotech Mol Biol Rev. 2007, 2: 68-85.
Google Scholar
Mundy J, Rogers JC: Selective expression of a probable amylase/protease inhibitor in barley aleurone cell: Comparison to the baeley amylase/subtilisin inhibitor. Planta. 1986, 169: 51-63. 10.1007/BF01369775.
Article
CAS
PubMed
Google Scholar
Jung KH, Dardick C, Bartley LE, Cao P, Phetsom J, Canlas P, Seo YS, Shultz M, Ouyang S, Yuan Q, Frank BC, Ly E, Zheng L, Jia Y, Hsia AP, An K, Chou HH, Rocke D, Lee GC, Schnable PS, An G, Buell CR, Ronald PC: Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy. PLoS ONE. 2008, 3: e3337-10.1371/journal.pone.0003337.
Article
PubMed
PubMed Central
Google Scholar
Giménez MJ, Pistón F, Atienza SG: Identification of suitable reference genes for normalization of qPCR data in comparative transcriptomics analyses in the Triticeae. Planta. 2010, 233: 163-173.
Article
PubMed
Google Scholar
Vicente-Carbajosa J, Carbonero P: Seed maturation: developing an intrusive phase to accomplish a quiescent state. Int J Dev Biol. 2005, 49: 645-651. 10.1387/ijdb.052046jc.
Article
CAS
PubMed
Google Scholar
Shewry PR, Halford NG: Cereal seed storage proteins: structures, properties and role in grain utilization. J Exp Bot. 2002, 53: 947-958. 10.1093/jexbot/53.370.947.
Article
CAS
PubMed
Google Scholar
Gibbings JG, Cook BP, Dufault MR, Madden SL, Khuri S, Turnbull CJ, Dunwell JM: Global transcript analysis of rice leaf and seed using SAGE technology. Plant Biotechnol J. 2003, 1: 271-285. 10.1046/j.1467-7652.2003.00026.x.
Article
CAS
PubMed
Google Scholar
Drea S, Leader DJ, Arnold BC, Shaw P, Dolan L, Doonan JH: Systematic spatial analysis of gene expression during wheat caryopsis development. Plant Cell. 2005, 17: 2172-2185. 10.1105/tpc.105.034058.
Article
CAS
PubMed
PubMed Central
Google Scholar
Xu H, Li Y, Yan Y, Wang K, Gao Y, Hu Y: Genome-scale identification of Soybean BURP domain-containing genes and their expression under stress treatments. BMC Plant Biol. 2010, 10: 197-10.1186/1471-2229-10-197.
Article
PubMed
PubMed Central
Google Scholar
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP: F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol. 2007, 143: 1467-1483. 10.1104/pp.106.091900.
Article
CAS
PubMed
PubMed Central
Google Scholar
Eisen MB, Spellman PT, Brown PO, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci. 1998, 95: 14863-14868. 10.1073/pnas.95.25.14863.
Article
CAS
PubMed
PubMed Central
Google Scholar