Gier HT, Marion GB: Uterus of the cow after parturition: involutional changes. Am J Vet Res. 1968, 29: 83-96.
CAS
PubMed
Google Scholar
Sheldon IM, Dobson H: Postpartum uterine health in cattle. Anim Reprod Sci. 2004, 82–83: 295-306.
Article
PubMed
Google Scholar
Singh J, Murray RD, Mshelia G, Woldehiwet Z: The immune status of the bovine uterus during the peripartum period. Vet J. 2008, 175: 301-309. 10.1016/j.tvjl.2007.02.003.
Article
CAS
PubMed
Google Scholar
Bondurant RH: Inflammation in the bovine female reproductive tract. J Anim Sci. 1999, 77: 101-110.
CAS
PubMed
Google Scholar
Gabler C, Fischer C, Drillich M, Einspanier R, Heuwieser W: Time-dependent mRNA expression of selected pro-inflammatory factors in the endometrium of primiparous cows postpartum. Reprod Biol Endocrinol. 2010, 8: 152-10.1186/1477-7827-8-152.
Article
PubMed Central
CAS
PubMed
Google Scholar
Chapwanya A, Meade KG, Foley C, Narciandi F, Evans AC, Doherty ML, Callanan JJ, O’Farrelly C: The postpartum endometrial inflammatory response: a normal physiological event with potential implications for bovine fertility. Reprod Fertil Dev. 2012
Google Scholar
Hart J: Inflammation 2: its role in the healing of chronic wounds. J Wound Care. 2002, 7: 245-249.
Article
Google Scholar
Hart J: Inflammation 1: its role in the healing of acute wounds. J Wound Care. 2002, 11: 205-209.
Article
CAS
PubMed
Google Scholar
Kasimanickam R, Duffield TF, Foster RA, Gartley CJ, Leslie KE, Walton JS, Johnson WH: A comparison of the cytobrush and uterine lavage techniques to evaluate endometrial cytology in clinically normal postpartum dairy cows. Can Vet J. 2005, 46: 255-259.
PubMed Central
PubMed
Google Scholar
Chapwanya A, Meade KG, Doherty ML, Callanan JJ, Mee JF, O’Farrelly C: Histopathological and molecular evaluation of Holstein-Friesian cows postpartum: toward an improved understanding of uterine innate immunity. Theriogenology. 2009, 71: 1396-1407. 10.1016/j.theriogenology.2009.01.006.
Article
CAS
PubMed
Google Scholar
Herath S, Lilly ST, Santos NR, Gilbert RO, Goetze L, Bryant CE, White JO, Cronin J, Sheldon IM: Expression of genes associated with immunity in the endometrium of cattle with disparate postpartum uterine disease and fertility. Reprod Biol Endocrinol. 2009, 7: 55-10.1186/1477-7827-7-55.
Article
PubMed Central
PubMed
Google Scholar
Davies D, Meade KG, Herath S, Eckersall PD, Gonzalez D, White JO, Conlan RS, O’Farrelly C, Sheldon IM: Toll-like receptor and antimicrobial peptide expression in the bovine endometrium. Reprod Biol Endocrinol. 2008, 6: 53-10.1186/1477-7827-6-53.
Article
PubMed Central
PubMed
Google Scholar
da Paixão TA, Costa EA, Santos RL, Borges AM, Martins T da M Pires A de C: Postpartum toll-like receptors and β-defensin 5 mRNA levels in the endometrium of Holstein cows. Vet Immunol Immunopathol. 2011, 139: 277-281. 10.1016/j.vetimm.2010.09.012.
Article
PubMed
Google Scholar
Sheldon IM, Lewis GS, LeBlanc S, Gilbert RO: Defining postpartum uterine disease in cattle. Theriogenology. 2006, 65: 1516-1530. 10.1016/j.theriogenology.2005.08.021.
Article
PubMed
Google Scholar
Sheldon IM, Cronin J, Goetze L, Donofrio G, Schuberth H-J: Defining postpartum uterine disease and the mechanisms of infection and immunity in the female reproductive tract in cattle. Biol Reprod. 2009, 81: 1025-1032. 10.1095/biolreprod.109.077370.
Article
PubMed Central
CAS
PubMed
Google Scholar
Herath S, Lilly ST, Fischer DP, Williams EJ, Dobson H, Bryant CE, Sheldon IM: Bacterial lipopolysaccharide induces an endocrine switch from prostaglandin F2alpha to prostaglandin E2 in bovine endometrium. Endocrinology. 2009, 150: 1912-1920. 10.1210/en.2008-1379.
Article
PubMed Central
CAS
PubMed
Google Scholar
Sheldon IM, Rycroft AN, Dogan B, Craven M, Bromfield JJ, Roberts MH, Chandler A, Price SB, Gilbert RO, Simpson KW: Specific Strains of Escherichia coli Are Pathogenic for the Endometrium of Cattle and Cause Pelvic Inflammatory Disease in Cattle and Mice. PLoS One. 2012, 5: e9192-
Article
Google Scholar
Cronin JG, Turner ML, Goetze L, Bryant CE, Sheldon IM: Toll-like receptor 4 and MYD88-dependent signaling mechanisms of the innate immune system are essential for the response to lipopolysaccharide by epithelial and stromal cells of the bovine endometrium. Biol Reprod. 2012, 86: 51-10.1095/biolreprod.111.092718.
Article
PubMed Central
PubMed
Google Scholar
Wathes DC, Cheng Z, Chowdhury W, Fenwick MA, Fitzpatrick R, Morris DG, Patton J, Murphy JJ, Wathes DC, Cheng Z, Chowdhury W, Fenwick MA, Fitzpatrick R, Morris DG, Patton J, Murphy JJ: Negative energy balance alters global gene expression and immune responses in the uterus of postpartum dairy cows. Physiol Genomics. 2010, 39: 1-13.
Article
Google Scholar
Galvão KN, Santos NR, Galvão JS, Gilbert RO: Association between endometritis and endometrial cytokine expression in postpartum Holstein cows. Theriogenology. 2011, 76: 290-299. 10.1016/j.theriogenology.2011.02.006.
Article
PubMed
Google Scholar
Borges AM, Healey GD, Sheldon IM: Explants of Intact Endometrium to Model Bovine Innate Immunity and Inflammation Ex Vivo. Am J Reprod Immunol. 2012, 67: 526-539. 10.1111/j.1600-0897.2012.01106.x.
Article
CAS
PubMed
Google Scholar
Wang Z, Gerstein M, Snyder M: RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet. 2009, 10: 57-63. 10.1038/nrg2484.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kim I-H, Na K-J, Yang M-P: Immune responses during the peripartum period in dairy cows with postpartum endometritis. J Reprod Dev. 2005, 51: 757-764. 10.1262/jrd.17036.
Article
CAS
PubMed
Google Scholar
Maybin JA, Critchley HOD, Jabbour HN: Inflammatory pathways in endometrial disorders. Mol Cell Endocrinol. 2011, 335: 42-51. 10.1016/j.mce.2010.08.006.
Article
CAS
PubMed
Google Scholar
Jabbour HN, Sales KJ, Catalano RD, Norman JE: Inflammatory pathways in female reproductive health and disease. Reproduction. 2009, 138: 903-919. 10.1530/REP-09-0247.
Article
CAS
PubMed
Google Scholar
Bauersachs S, Ulbrich SE, Gross K, Schmidt SEM, Meyer HHD, Wenigerkind H, Vermehren M, Sinowatz F, Blum H, Wolf E: Embryo-induced transcriptome changes in bovine endometrium reveal species-specific and common molecular markers of uterine receptivity. Reproduction. 2006, 132: 319-331. 10.1530/rep.1.00996.
Article
CAS
PubMed
Google Scholar
Klein C, Bauersachs S, Ulbrich SE, Einspanier R, Meyer HHD, Schmidt SEM, Reichenbach H-D, Vermehren M, Sinowatz F, Blum H, Wolf E: Monozygotic twin model reveals novel embryo-induced transcriptome changes of bovine endometrium in the preattachment period. Biol Reprod. 2006, 74: 253-264. 10.1095/biolreprod.105.046748.
Article
CAS
PubMed
Google Scholar
Chang HY, Sneddon JB, Alizadeh AA, Sood R, West RB, Montgomery K, Chi J-t, Rijn MVD, Botstein D, Brown PO: Gene Expression Signature of Fibroblast Serum Response Predicts Human Cancer Progression: Similarities between Tumors and Wounds. PLoS Biol. 2004, 2: 206-214. 10.1371/journal.pbio.0020206.
Article
CAS
Google Scholar
Lin S-l, Li B, Rao S, Yeo E-j, Hudson TE, Nowlin BT, Pei H, Chen L, Zheng JJ, Carroll TJ, Pollard JW, McMahon AP, Lang RA, Duffield JS: Macrophage Wnt7b is critical for kidney repair and regeneration. PNAS. 2010, 107: 2-7. 10.1073/pnas.0913026107.
Article
Google Scholar
Zhao J, Kim K-a, Abo A: Tipping the balance: modulating the Wnt pathway for tissue repair. Trends Biotechnol. 2009, 27: 131-136. 10.1016/j.tibtech.2008.11.007.
Article
CAS
PubMed
Google Scholar
Eckersall PD, Young FJ, Nolan AM, Knight CH, McComb C, Waterston MM, Hogarth CJ, Scott EM, Fitzpatrick JL: Acute phase proteins in bovine milk in an experimental model of Staphylococcus aureus subclinical mastitis. J Dairy Sci. 2006, 89: 1488-1501. 10.3168/jds.S0022-0302(06)72216-0.
Article
CAS
PubMed
Google Scholar
Suffredini AF, Fantuzzi G, Badolato R, Oppenheim JJ, O’Grady NP: New insights into the biology of the acute phase response. J Clin Immunol. 1999, 19: 203-214. 10.1023/A:1020563913045.
Article
CAS
PubMed
Google Scholar
Berg LC, Thomsen PD, Andersen PH, Jensen HE, Jacobsen S: Serum amyloid A is expressed in histologically normal tissues from horses and cattle. Vet Immunol Immunopathol. 2011, 144: 155-159. 10.1016/j.vetimm.2011.06.037.
Article
CAS
PubMed
Google Scholar
Lecchi C, Dilda F, Sartorelli P, Ceciliani F: Widespread expression of SAA and Hp RNA in bovine tissues after evaluation of suitable reference genes. Vet Immunol Immunopathol. 2012, 145: 556-562. 10.1016/j.vetimm.2011.12.017.
Article
CAS
PubMed
Google Scholar
Urieli-shoval S, Cohen P, Eisenberg S, Matzner Y: Widespread Expression of Serum Amyloid A in Histologically Normal Human Tissues: Predominant Localization to the Epithelium. J Histochem Cytochem. 1998, 47: 1377-1384.
Article
Google Scholar
Mitchell TI, Coon CI, Brinckerhoff CE: Serum Amyloid A (SAA3) Produced by Rabbit Synovial Fibroblasts Treated with Phorbol Esters or Interleukin 1 Induces Synthesis of Collagenase and Is Neutralized with Specific Antiserum. J Clin Invest. 1991, 87: 1177-1185. 10.1172/JCI115116.
Article
PubMed Central
CAS
PubMed
Google Scholar
Eckhardt ERM, Witta J, Zhong J, Arsenescu R, Arsenescu V, Wang Y, Ghoshal S, Beer MCD, Beer FCD, Villiers WJSD: Intestinal Epithelial Serum Amyloid A Modulates Bacterial Growth In Vitro and Pro-Inflammatory Responses in Mouse Experimental Colitis. BMC Gastroenterol. 2010, 10: 133-10.1186/1471-230X-10-133.
Article
PubMed Central
PubMed
Google Scholar
Bai H, Sakurai T, Kim M-S, Muroi Y, Ideta A, Aoyagi Y, Nakajima H, Takahashi M, Nagaoka K, Imakawa K: Involvement of GATA transcription factors in the regulation of endogenous bovine interferon-tau gene transcription. Mol Reprod Dev. 2009, 76: 1143-1152. 10.1002/mrd.21082.
Article
CAS
PubMed
Google Scholar
Bai H, Sakurai T, Konno T, Ideta A, Aoyagi Y, Godkin JD, Imakawa K: Expression of GATA1 in the Ovine Conceptus and Endometrium During the Peri-Attachment Period. Mol Reprod Dev. 2012, 73: 64-73.
Article
Google Scholar
Kanki Y, Kohro T, Jiang S, Tsutsumi S, Mimura I, Suehiro J-I, Wada Y, Ohta Y, Ihara S, Iwanari H, Naito M, Hamakubo T, Aburatani H, Kodama T, Minami T: Epigenetically coordinated GATA2 binding is necessary for endothelium-specific endomucin expression. EMBO J. 2011, 30: 2582-2595. 10.1038/emboj.2011.173.
Article
PubMed Central
CAS
PubMed
Google Scholar
Llewellyn S, Fitzpatrick R, Kenny DA, Patton J, Wathes DC: Endometrial expression of the insulin-like growth factor system during uterine involution in the postpartum dairy cow. Domest Anim Endocrinol. 2008, 34: 391-402. 10.1016/j.domaniend.2007.11.003.
Article
PubMed Central
CAS
PubMed
Google Scholar
Wathes DC, Cheng Z, Fenwick MA, Fitzpatrick R, Patton J: Influence of energy balance on the somatotrophic axis and matrix metalloproteinase expression in the endometrium of the postpartum dairy cow. Reproduction. 2011, 141: 269-281. 10.1530/REP-10-0177.
Article
PubMed Central
CAS
PubMed
Google Scholar
Elis S, Wu Y, Courtland H-w, Cannata D, Sun H, Beth-on M, Liu C, Jasper H, Domené H, Karabatas L, Guida C, Basta-pljakic J, Cardoso L, Rosen CJ, Frystyk J, Yakar S: Unbound (bioavailable) IGF1 enhances somatic growth. Dis Model Mech. 2011, 4: 649-658. 10.1242/dmm.006775.
Article
PubMed Central
CAS
PubMed
Google Scholar
Velazquez MA, Hadeler K-G, Herrmann D, Kues WA, Ulbrich S, Meyer HHD, Rémy B, Beckers J-F, Sauerwein H, Niemann H: In vivo oocyte developmental competence is reduced in lean but not in obese superovulated dairy cows after intraovarian administration of IGF1. Reproduction. 2011, 142: 41-52. 10.1530/REP-10-0512.
Article
CAS
PubMed
Google Scholar
Johnson FM, Gallick GE: SRC family nonreceptor tyrosine kinases as molecular targets for cancer therapy. Anti-cancer agents in medicinal chemistry. 2007, 7: 651-659. 10.2174/187152007784111278.
Article
CAS
PubMed
Google Scholar
Krishnaswamy N, Lacroix-Pepin N, Chapdelaine P, Taniguchi H, Kauffenstein G, Chakravarti A, Danyod G, Fortier MA: Epidermal growth factor receptor is an obligatory intermediate for oxytocin-induced cyclooxygenase 2 expression and prostaglandin F2 alpha production in bovine endometrial epithelial cells. Endocrinology. 2010, 151: 1367-1374. 10.1210/en.2009-1304.
Article
CAS
PubMed
Google Scholar
Ing NH, Roberts RM: The Major Progesterone-modulated Proteins Secreted into the Sheep Uterus Are Members of the Serpin Superfamily of Serine Protease Inhibitors. J Biol Chem. 1989, 264: 3372-3379.
CAS
PubMed
Google Scholar
Heutinck KM, Ineke JM, Hack CE, Hamann J, Rowshani AT: Serine proteases of the human immune system in health and disease. Mol Immunol. 2010, 47: 1943-1955. 10.1016/j.molimm.2010.04.020.
Article
CAS
PubMed
Google Scholar
Khatib H, Schutzkus V, Chang YM, Rosa GJM: Pattern of expression of the uterine milk protein gene and its association with productive life in dairy cattle. J Dairy Sci. 2007, 90: 2427-2433. 10.3168/jds.2006-722.
Article
CAS
PubMed
Google Scholar
Ulbrich SE, Frohlich T, Schulke K, Englberger E, Waldschmitt N, Arnold GJ, Reichenbach H-D, Reichenbach M, Wolf E, Meyer HHD, Bauersachs S: Evidence for estrogen-dependent uterine serpin (SERPINA14) expression during estrus in the bovine endometrial glandular epithelium and lumen. Biol Reprod. 2009, 81: 795-805. 10.1095/biolreprod.108.075184.
Article
CAS
PubMed
Google Scholar
Bauersachs S, Ulbrich SE, Gross K, Schmidt SEM, Meyer HHD, Einspanier R, Wenigerkind H, Vermehren M, Blum H, Sinowatz F, Wolf E: Gene expression profiling of bovine endometrium during the oestrous cycle: detection of molecular pathways involved in functional changes. J Mol Endocrinol. 2005, 34: 889-908. 10.1677/jme.1.01799.
Article
CAS
PubMed
Google Scholar
Tekin S, Hansen PJ: Natural killer-like cells in the sheep: functional characterization and regulation by pregnancy-associated proteins. Exp Biol Med. 2002, 227: 803-811.
CAS
Google Scholar
Gray CA, Stewart MD, Johnson GA, Spencer TE: Postpartum uterine involution in sheep: histoarchitecture and changes in endometrial gene expression. Reproduction. 2003, 125: 185-198. 10.1530/rep.0.1250185.
Article
CAS
PubMed
Google Scholar
Liu Y, Qin X, Song X-zhi H, Jiang H, Shen Y, Durbin KJ, Lien S, Kent MP, Sodeland M, Ren Y, Zhang L, Sodergren E, Havlak P, Worley KC, Weinstock GM, Gibbs RA: Bos taurus genome assembly. BMC Genomics. 2009, 10: 1-11. 10.1186/1471-2164-10-1.
Article
Google Scholar
Langmead B, Trapnell C, Pop M, Salzberg SL: Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:
Google Scholar
Trapnell C, Pachter L, Salzberg SL: TopHat: discovering splice junctions with RNA-Seq. Bioinformatics. 2009, 25: 1105-1111. 10.1093/bioinformatics/btp120.
Article
PubMed Central
CAS
PubMed
Google Scholar
Robinson MD, McCarthy DJ, Smyth GK: edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010, 26: 139-140. 10.1093/bioinformatics/btp616.
Article
PubMed Central
CAS
PubMed
Google Scholar
Robinson MD, Oshlack A: A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol. 2010, 11: R25-10.1186/gb-2010-11-3-r25.
Article
PubMed Central
PubMed
Google Scholar
Benjamini Y, Hochberg Y: Controlling the False Discovery Rate: a Practical and Powerful Approach to Multiple Testing. J R Stat Soc. 1995, 57: 289-300.
Google Scholar
Young MD, Wakefield MJ, Smyth GK, Oshlack A: Gene ontology analysis for RNA-seq: accounting for selection bias. Genome Biol. 2010, 11: R14-10.1186/gb-2010-11-2-r14.
Article
PubMed Central
PubMed
Google Scholar
Rozen S, Skaletsky H: Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol. 2000, 132: 365-386.
CAS
PubMed
Google Scholar
Walker CG, Meier S, Mitchell MD, Roche JR, Littlejohn M: Evaluation of real-time PCR endogenous control genes for analysis of gene expression in bovine endometrium. BMC Mol Biol. 2009, 10: 100-10.1186/1471-2199-10-100.
Article
PubMed Central
PubMed
Google Scholar
Coyne GS, Kenny DA, Waters SM: Effect of dietary n-3 polyunsaturated fatty acid supplementation on bovine uterine endometrial and hepatic gene expression of the insulin-like growth factor system. Theriogenology. 2011, 75: 500-512. 10.1016/j.theriogenology.2010.09.018.
Article
CAS
PubMed
Google Scholar
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F: Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002, 3: RESEARCH0034
Google Scholar