Rosewich UL, Kistler HC: Role of horizontal gene transfer in the evolution of fungi.Annu Rev Phytopathol 2000, 38:325–363. 10.1146/annurev.phyto.38.1.325
Article
CAS
PubMed
Google Scholar
Koonin EV, Wolf YI: Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world.Nucleic Acids Res 2008, 36:6688–6719. 10.1093/nar/gkn668
Article
CAS
PubMed
PubMed Central
Google Scholar
Wolf YI, Makarova KS, Yutin N, Koonin EV: Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer.Biol Direct 2012, 7:46. 10.1186/1745-6150-7-46
Article
CAS
PubMed
PubMed Central
Google Scholar
Borziak K, Fleetwood AD, Zhulin IB: Chemoreceptor gene loss and acquisition via horizontal gene transfer inEscherichia coli.J Bacteriol 2013, 195:3596–3602. 10.1128/JB.00421-13
Article
CAS
PubMed
PubMed Central
Google Scholar
Kitahara K, Miyazaki K: Revisiting bacterial phylogeny: natural and experimental evidence for horizontal gene transfer of 16S rRNA.Mob Genet Elem 2013, 3:e24210. 10.4161/mge.24210
Article
Google Scholar
Schaack S, Gilbert C, Feschotte C: Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution.Trends Ecol Evol 2010, 25:537–546. 10.1016/j.tree.2010.06.001
Article
PubMed
PubMed Central
Google Scholar
Ma L-J, van der Does HC, Borkovich KA, Coleman JJ, Daboussi M-J, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim W-B, Woloshuk C, Xie X, Xu J-R, Antoniw J, Baker SE, Bluhm BH, Breakspear A, Brown DW, Butchko RAE, Chapman S, Coulson R, Coutinho PM, Danchin EGJ, Diener A, Gale LR, Gardiner DM, Goff S, et al.: Comparative genomics reveals mobile pathogenicity chromosomes inFusarium.Nature 2010, 464:367–373. 10.1038/nature08850
Article
CAS
PubMed
PubMed Central
Google Scholar
Mehrabi R, Bahkali AH, Abd-Elsalam KA, Moslem M, Ben M’barek S, Gohari AM, Jashni MK, Stergiopoulos I, Kema GHJ, de Wit PJGM: Horizontal gene and chromosome transfer in plant pathogenic fungi affecting host range.FEMS Microbiol Rev 2011, 35:542–554. 10.1111/j.1574-6976.2010.00263.x
Article
CAS
PubMed
Google Scholar
Milani NA, Lawrence DP, Arnold AE, VanEtten HD: Origin of pisatin demethylase (PDA) in the genusFusarium.Fungal Genet Biol 2012, 49:933–942. 10.1016/j.fgb.2012.08.007
Article
CAS
PubMed
Google Scholar
Sun B-F, Xiao J-H, He S, Liu L, Murphy RW, Huang D-W: Multiple interkingdom horizontal gene transfers inPyrenophoraand closely related species and their contributions to phytopathogenic lifestyles.PLoS One 2013, 8:e60029. 10.1371/journal.pone.0060029
Article
CAS
PubMed
PubMed Central
Google Scholar
Richards TA, Dacks JB, Jenkinson JM, Thornton CR, Talbot NJ: Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms.Curr Biol 2006, 16:1857–1864. 10.1016/j.cub.2006.07.052
Article
CAS
PubMed
Google Scholar
Richards TA, Leonard G, Soanes DM, Talbot NJ: Gene transfer into the fungi.Fungal Biol Rev 2011, 25:98–110. 10.1016/j.fbr.2011.04.003
Article
Google Scholar
Irelan JT, Selker EU: Gene silencing in filamentous fungi: RIP, MIP and quelling.J Genet 1996, 75:313–324. 10.1007/BF02966311
Article
CAS
Google Scholar
Richards TA, Hirt RP, Williams BAP, Embley TM: Horizontal gene transfer and the evolution of parasitic protozoa.Protist 2003, 154:17–32. 10.1078/143446103764928468
Article
PubMed
Google Scholar
Keeling PJ, Palmer JD: Horizontal gene transfer in eukaryotic evolution.Nat Rev Genet 2008, 9:605–618. 10.1038/nrg2386
Article
CAS
PubMed
Google Scholar
Fitzpatrick DA: Horizontal gene transfer in fungi.FEMS Microbiol Lett 2011, 329:1–8.
Article
PubMed
Google Scholar
Griffiths AJ: Natural plasmids of filamentous fungi.Microbiol Rev 1995, 59:673–685.
CAS
PubMed
PubMed Central
Google Scholar
Doolittle WF: You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes.Trends Genet 1998, 14:307–311. 10.1016/S0168-9525(98)01494-2
Article
CAS
PubMed
Google Scholar
Friesen TL, Stukenbrock EH, Liu Z, Meinhardt S, Ling H, Faris JD, Rasmussen JB, Solomon PS, McDonald BA, Oliver RP: Emergence of a new disease as a result of interspecific virulence gene transfer.Nat Genet 2006, 38:953–956. 10.1038/ng1839
Article
CAS
PubMed
Google Scholar
Richards TA, Soanes DM, Foster PG, Leonard G, Thornton CR, Talbot NJ: Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi.Plant Cell 2009, 21:1897–1911. 10.1105/tpc.109.065805
Article
CAS
PubMed
PubMed Central
Google Scholar
Slot JC, Rokas A: Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi.Proc Natl Acad Sci U S A 2010, 107:10136–10141. 10.1073/pnas.0914418107
Article
CAS
PubMed
PubMed Central
Google Scholar
Azad RK, Lawrence JG: Detecting laterally transferred genes.Methods Mol Biol 2012, 855:281–308. 10.1007/978-1-61779-582-4_10
Article
CAS
PubMed
Google Scholar
Brown JR: Ancient horizontal gene transfer.Nat Rev Genet 2003, 4:121–132. 10.1038/nrg1000
Article
CAS
PubMed
Google Scholar
Dean R, Van Kan JAL, Pretorius ZA, Hammond-Kosack KE, Di Pietro A, Spanu PD, Rudd JJ, Dickman M, Kahmann R, Ellis J, Foster GD: The Top 10 fungal pathogens in molecular plant pathology.Mol Plant Pathol 2012, 13:414–430. 10.1111/j.1364-3703.2011.00783.x
Article
PubMed
Google Scholar
Hyde KD, Cai L, Cannon PF, Crouch JA, Crous PW, Damm U, Goodwin PH, Chen H, Johnston PR, Jones EBG: Colletotrichum—names in current use.Fungal Divers 2009, 39:147.
Google Scholar
Prusky D, Freeman S, Dickman MB: Colletotrichum: Host Specificity, Pathology, and Host-Pathogen Interaction. United States of America: American Phytopathological Society (APS Press); 2000.
Google Scholar
Sukno SA, García VM, Shaw BD, Thon MR: Root infection and systemic colonization of maize byColletotrichum graminicola.Appl Environ Microbiol 2008, 74:823–832. 10.1128/AEM.01165-07
Article
CAS
PubMed
Google Scholar
Thon M, Nuckles E, Takach J, Vaillancourt L: CPR1: a gene encoding a putative signal peptidase that functions in pathogenicity ofColletotrichum graminicolato maize.Mol Plant-Microbe Interact 2002, 15:120–128. 10.1094/MPMI.2002.15.2.120
Article
CAS
PubMed
Google Scholar
Vargas WA, Martín JMS, Rech GE, Rivera LP, Benito EP, Díaz-Mínguez JM, Thon MR, Sukno SA: Plant defense mechanisms are activated during biotrophic and necrotrophic development ofColletotrichum graminicolain maize.Plant Physiol 2012, 158:1342–1358. 10.1104/pp.111.190397
Article
CAS
PubMed
PubMed Central
Google Scholar
O’Connell RJ, Thon MR, Hacquard S, Amyotte SG, Kleemann J, Torres MF, Damm U, Buiate EA, Epstein L, Alkan N, Altmüller J, Alvarado-Balderrama L, Bauser CA, Becker C, Birren BW, Chen Z, Choi J, Crouch JA, Duvick JP, Farman MA, Gan P, Heiman D, Henrissat B, Howard RJ, Kabbage M, Koch C, Kracher B, Kubo Y, Law AD, Lebrun M-H, et al.: Lifestyle transitions in plant pathogenicColletotrichumfungi deciphered by genome and transcriptome analyses.Nat Genet 2012, 44:1060–1065. 10.1038/ng.2372
Article
PubMed
Google Scholar
Gan P, Ikeda K, Irieda H, Narusaka M, O’Connell RJ, Narusaka Y, Takano Y, Kubo Y, Shirasu K: Comparative genomic and transcriptomic analyses reveal the hemibiotrophic stage shift ofColletotrichumfungi.New Phytol 2013, 197:1236–1249. 10.1111/nph.12085
Article
CAS
PubMed
Google Scholar
Alkan N, Meng X, Friedlander G, Reuveni E, Sukno S, Sherman A, Thon M, Fluhr R, Prusky D: Global aspects of pacC regulation of pathogenicity genes inColletotrichum gloeosporioidesas revealed by transcriptome analysis.Mol Plant Microbe Interact 2013, 26:1345–1358. 10.1094/MPMI-03-13-0080-R
Article
CAS
PubMed
Google Scholar
Armijos Jaramillo VD, Vargas WA, Sukno SA, Thon MR: Horizontal transfer of a subtilisin gene from plants into an ancestor of the plant pathogenic fungal genusColletotrichum.PLoS One 2013, 8:e59078. 10.1371/journal.pone.0059078
Article
CAS
PubMed
PubMed Central
Google Scholar
Marcet-Houben M, Gabaldón T: Acquisition of prokaryotic genes by fungal genomes.Trends Genet 2010, 26:5–8. 10.1016/j.tig.2009.11.007
Article
CAS
PubMed
Google Scholar
Schomburg I, Chang A, Placzek S, Söhngen C, Rother M, Lang M, Munaretto C, Ulas S, Stelzer M, Grote A, Scheer M, Schomburg D: BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA.Nucleic Acids Res 2013,41(Database issue):D764-D772.
Article
CAS
PubMed
Google Scholar
Kanehisa M, Goto S, Sato Y, Furumichi M, Tanabe M: KEGG for integration and interpretation of large-scale molecular data sets.Nucleic Acids Res 2012,40(Database issue):D109-D114.
Article
CAS
PubMed
Google Scholar
Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, Kaipa P, Karthikeyan AS, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Paley S, Popescu L, Pujar A, Shearer AG, Zhang P, Karp PD: The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.Nucleic Acids Res 2010,38(suppl 1):D473-D479.
Article
CAS
PubMed
Google Scholar
Rawlings ND, Barrett AJ, Bateman A: MEROPS: the database of proteolytic enzymes, their substrates and inhibitors.Nucleic Acids Res 2011, 40:D343-D350.
Article
PubMed
PubMed Central
Google Scholar
Lombard V, Golaconda Ramulu H, Drula E, Coutinho PM, Henrissat B: The carbohydrate-active enzymes database (CAZy) in 2013.Nucleic Acids Res 2013, 42:D490-D495.
Article
PubMed
PubMed Central
Google Scholar
Jogl G, Hsiao Y-S, Tong L: Structure and function of carnitine acyltransferases.Ann N Y Acad Sci 2004, 1033:17–29. 10.1196/annals.1320.002
Article
CAS
PubMed
Google Scholar
Zhao Z, Liu H, Wang C, Xu J-R: Correction: comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi.BMC Genomics 2014, 15:6. 10.1186/1471-2164-15-6
Article
PubMed
PubMed Central
Google Scholar
Smith K, Nadeau K, Bradley M, Walsh C, Fairlamb AH: Purification of glutathionylspermidine and trypanothione synthetases fromCrithidia fasciculata.Protein Sci 1992, 1:874–883. 10.1002/pro.5560010705
Article
CAS
PubMed
PubMed Central
Google Scholar
Chiang B-Y, Chen T-C, Pai C-H, Chou C-C, Chen H-H, Ko T-P, Hsu W-H, Chang C-Y, Wu W-F, Wang AH-J, Lin C-H: Protein S-thiolation by glutathionylspermidine (Gsp): the role ofescherichia coliGsp synthetASE/amidase in redox regulation.J Biol Chem 2010, 285:25345–25353. 10.1074/jbc.M110.133363
Article
CAS
PubMed
PubMed Central
Google Scholar
Zhao Z, Liu H, Wang C, Xu J-R: Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi.BMC Genomics 2013, 14:274. 10.1186/1471-2164-14-274
Article
CAS
PubMed
PubMed Central
Google Scholar
Van Vu B, Itoh K, Nguyen QB, Tosa Y, Nakayashiki H: Cellulases belonging to glycoside hydrolase families 6 and 7 contribute to the virulence ofMagnaporthe oryzae.Mol Plant Microbe Interact 2012, 25:1135–1141. 10.1094/MPMI-02-12-0043-R
Article
PubMed
Google Scholar
Inderbitzin P, Asvarak T, Turgeon BG: Six new genes required for production of T-toxin, a polyketide determinant of high virulence ofCochliobolus heterostrophusto maize.Mol Plant Microbe Interact 2010, 23:458–472. 10.1094/MPMI-23-4-0458
Article
CAS
PubMed
Google Scholar
Yasmin S, Alcazar-Fuoli L, Gründlinger M, Puempel T, Cairns T, Blatzer M, Lopez JF, Grimalt JO, Bignell E, Haas H: Mevalonate governs interdependency of ergosterol and siderophore biosyntheses in the fungal pathogenAspergillus fumigatus.Proc Natl Acad Sci U S A 2012, 109:E497-E504. 10.1073/pnas.1106399108
Article
CAS
PubMed
Google Scholar
Namiki F, Matsunaga M, Okuda M, Inoue I, Nishi K, Fujita Y, Tsuge T: Mutation of an arginine biosynthesis gene causes reduced pathogenicity inFusarium oxysporumf. sp.melonis.Mol Plant Microbe Interact 2001, 14:580–584. 10.1094/MPMI.2001.14.4.580
Article
CAS
PubMed
Google Scholar
Wapinski I, Pfeffer A, Friedman N, Regev A: Natural history and evolutionary principles of gene duplication in fungi.Nature 2007, 449:54–61. 10.1038/nature06107
Article
CAS
PubMed
Google Scholar
Taylor TN, Hass H, Kerp H, Krings M, Hanlin RT: Perithecial Ascomycetes from the 400 million year old rhynie chert: an example of ancestral polymorphism.Mycologia 2005, 97:269–285. 10.3852/mycologia.97.1.269
Article
CAS
PubMed
Google Scholar
Garcia-Vallvé S, Romeu A, Palau J: Horizontal gene transfer of glycosyl hydrolases of the rumen fungi.Mol Biol Evol 2000, 17:352–361. 10.1093/oxfordjournals.molbev.a026315
Article
PubMed
Google Scholar
Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi.PLoS One 2009, 4:e4437. 10.1371/journal.pone.0004437
Article
PubMed
PubMed Central
Google Scholar
Takahara H, Huser A, O’Connell R: Two arginine biosynthesis genes are essential for pathogenicity ofColletotrichum higginsianumonArabidopsis.Mycology 2012, 3:54–64.
CAS
Google Scholar
Boggs JM, South AH, Hughes AL: Phylogenetic analysis supports horizontal gene transfer of L-amino acid oxidase gene inStreptococcus oligofermentans.Infect Genet Evol 2012, 12:1005–1009. 10.1016/j.meegid.2012.02.014
Article
CAS
PubMed
PubMed Central
Google Scholar
Marri PR, Hao W, Golding GB: The role of laterally transferred genes in adaptive evolution.BMC Evol Biol 2007,7(Suppl 1):S8. 10.1186/1471-2148-7-S1-S8
Article
PubMed
PubMed Central
Google Scholar
Rohmer L, Hocquet D, Miller SI: Are pathogenic bacteria just looking for food? metabolism and microbial pathogenesis.Trends Microbiol 2011, 19:341–348. 10.1016/j.tim.2011.04.003
Article
CAS
PubMed
PubMed Central
Google Scholar
Soanes D, Richards TA: Horizontal gene transfer in eukaryotic plant pathogens.Annu Rev Phytopathol 2014, 52:583–614. 10.1146/annurev-phyto-102313-050127
Article
CAS
PubMed
Google Scholar
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.Nucleic Acids Res 1997, 25:3389–3402. 10.1093/nar/25.17.3389
Article
CAS
PubMed
PubMed Central
Google Scholar
Katoh K, Misawa K, Kuma K, Miyata T: MAFFT: a novel method for rapid multiple sequence alignment based on fast fourier transform.Nucleic Acids Res 2002, 30:3059–3066. 10.1093/nar/gkf436
Article
CAS
PubMed
PubMed Central
Google Scholar
Talavera G, Castresana J: Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments.Syst Biol 2007, 56:564–577. 10.1080/10635150701472164
Article
CAS
PubMed
Google Scholar
Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W, Gascuel O: New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.Syst Biol 2010, 59:307–321. 10.1093/sysbio/syq010
Article
CAS
PubMed
Google Scholar
Moreira D, Philippe H: Molecular phylogeny: pitfalls and progress.Int Microbiol 2000, 3:9–16.
CAS
PubMed
Google Scholar
Rech G PhD tesis. In Insight into the evolution of a plant pathogen: comparative genomic analysis of the fungal maize pathogen Colletotrichum graminicola. Universidad de Salamanca, Departamento de microbiología y genética; 2013.
Google Scholar
Hendy MD, Penny D: A framework for the quantitative study of evolutionary trees.Syst Biol 1989, 38:297–309.
Google Scholar
Ronquist F, Huelsenbeck JP: MrBayes 3: bayesian phylogenetic inference under mixed models.Bioinformatics 2003, 19:1572–1574. 10.1093/bioinformatics/btg180
Article
CAS
PubMed
Google Scholar
Notredame C, Higgins DG, Heringa J: T-coffee: a novel method for fast and accurate multiple sequence alignment.J Mol Biol 2000, 302:205–217. 10.1006/jmbi.2000.4042
Article
CAS
PubMed
Google Scholar
Pruitt KD, Tatusova T, Brown GR, Maglott DR: NCBI reference sequences (RefSeq): current status, new features and genome annotation policy.Nucleic Acids Res 2012, 40:D130-D135. 10.1093/nar/gkr1079
Article
CAS
PubMed
Google Scholar
Kohany O, Gentles AJ, Hankus L, Jurka J: Annotation, submission and screening of repetitive elements in repbase: RepbaseSubmitter and censor.BMC Bioinforma 2006, 7:474. 10.1186/1471-2105-7-474
Article
Google Scholar
Stöver BC, Müller KF: TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses.BMC Bioinforma 2010, 11:7. 10.1186/1471-2105-11-7
Article
Google Scholar
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.Bioinformatics 2005, 21:3674–3676. 10.1093/bioinformatics/bti610
Article
CAS
PubMed
Google Scholar
Zdobnov EM, Apweiler R: InterProScan–an integration platform for the signature-recognition methods in InterPro.Bioinformatics 2001, 17:847–848. 10.1093/bioinformatics/17.9.847
Article
CAS
PubMed
Google Scholar
Horton P, Park K-J, Obayashi T, Fujita N, Harada H, Adams-Collier CJ, Nakai K: WoLF PSORT: protein localization predictor.Nucleic Acids Res 2007,35(Web Server):W585-W587. 10.1093/nar/gkm259
Article
PubMed
PubMed Central
Google Scholar
Petersen TN, Brunak S, von Heijne G, Nielsen H: SignalP 4.0: discriminating signal peptides from transmembrane regions.Nat Methods 2011, 8:785–786. 10.1038/nmeth.1701
Article
CAS
PubMed
Google Scholar
Winnenburg R, Urban M, Beacham A, Baldwin TK, Holland S, Lindeberg M, Hansen H, Rawlings C, Hammond-Kosack KE, Köhler J: PHI-base update: additions to the pathogen host interaction database.Nucleic Acids Res 2008,36(Database issue):D572-D576.
CAS
PubMed
Google Scholar
Chen L, Xiong Z, Sun L, Yang J, Jin Q: VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors.Nucleic Acids Res 2012,40(Database issue):D641-D645.
Article
CAS
PubMed
Google Scholar
Lu T, Yao B, Zhang C: DFVF: database of fungal virulence factors.Database (Oxford) 2012, 2012:bas032.
Google Scholar
R Development Core Team: R: A Language and Environment for Statistical Computing. R. Vienna, Austria: R Foundation for Statistical Computing; 2011.
Google Scholar
Peden JF Ph.D Thesis. In Analysis of Codon Usage. University of Nottingham; 1999.
Google Scholar
Marthey S, Aguileta G, Rodolphe F, Gendrault A, Giraud T, Fournier E, Lopez-Villavicencio M, Gautier A, Lebrun M-H, Chiapello H: Funybase: a fungal phylogenomic database.BMC Bioinforma 2008, 9:456. 10.1186/1471-2105-9-456
Article
Google Scholar
Aguileta G, Marthey S, Chiapello H, Lebrun M-H, Rodolphe F, Fournier E, Gendrault-Jacquemard A, Giraud T: Assessing the performance of single-copy genes for recovering robust phylogenies.Syst Biol 2008, 57:613–627. 10.1080/10635150802306527
Article
CAS
PubMed
Google Scholar
Edgar RC: MUSCLE: multiple sequence alignment with high accuracy and high throughput.Nucleic Acids Res 2004, 32:1792–1797. 10.1093/nar/gkh340
Article
CAS
PubMed
PubMed Central
Google Scholar
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG: Clustal W and Clustal X version 20.Bioinformatics 2007, 23:2947–2948. 10.1093/bioinformatics/btm404
Article
CAS
PubMed
Google Scholar
Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T: trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.Bioinformatics 2009, 25:1972–1973. 10.1093/bioinformatics/btp348
Article
PubMed
PubMed Central
Google Scholar
Penn O, Privman E, Ashkenazy H, Landan G, Graur D, Pupko T: GUIDANCE: a web server for assessing alignment confidence scores.Nucleic Acids Res 2010,38(Web Server issue):W23-W28.
Article
CAS
PubMed
PubMed Central
Google Scholar
Lanfear R, Calcott B, Ho SYW, Guindon S: Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses.Mol Biol Evol 2012, 29:1695–1701. 10.1093/molbev/mss020
Article
CAS
PubMed
Google Scholar
Drummond AJ, Suchard MA, Xie D, Rambaut A: Bayesian phylogenetics with BEAUti and the BEAST 1.7.Mol Biol Evol 2012, 29:1969–1973. 10.1093/molbev/mss075
Article
CAS
PubMed
PubMed Central
Google Scholar
Lucking R, Huhndorf S, Pfister DH, Plata ER, Lumbsch HT: Fungi evolved right on track.Mycologia 2009, 101:810–822. 10.3852/09-016
Article
PubMed
Google Scholar
Rambaut A, Drummond AJ: Tracer v1.4. 2007.
Google Scholar