Lesk C, Rowhani P, Ramankutty N. Influence of extreme weather disasters on global crop production. Nature. 2016;529:84–7.
Article
CAS
PubMed
Google Scholar
Lobell DB, Asner GP. Climate and management contributions to recent trends in U.S. agricultural yields. Science. 2003;299:1032.
Article
CAS
PubMed
Google Scholar
Lobell DB, Schlenker W, Costa-Roberts J. Climate trends and global crop production since 1980. Science. 2011;333:616–20.
Article
CAS
PubMed
Google Scholar
Solomon S, Qin D, Manning M, Chen Z, Marquis M, Averyt KB, et al. IPCC, in climate change 2007: the physical science basis. In: Contribution of working group I to the fourth assessment report of the intergovernmental panel on climate change. Cambridge: Cambridge University Press; 2007.
Google Scholar
Alexander LV, Zhang X, Peterson TC, Caesar J, Gleason B, Klein Tank AMG, et al. Global observed changes in daily climate extremes of temperature and precipitation. J Geophys Res. 2006;111:D05109.
Google Scholar
Vacca RA, de Pinto MC, Valenti D, Passarella S, Marra E, De Gara L. Production of reactive oxygen species, alteration of cytosolic ascorbate peroxidase, and impairment of mitochondrial metabolism are early events in heat shock-induced programmed cell death in tobacco bright-yellow 2 cells. Plant Physiol. 2004;134:1100–12.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kobza J, Edwards GE. Influences of leaf temperature on photosynthetic carbon metabolism in wheat. Plant Physiol. 1987;83:69–74.
Article
CAS
PubMed
PubMed Central
Google Scholar
Busch FA, Sage RF. The sensitivity of photosynthesis to O2 and CO2 concentration identifies strong rubisco control above the thermal optimum. New Phytol. 2017;213:1036–51.
Article
CAS
PubMed
Google Scholar
Law RD, Crafts-Brandner SJ. Inhibition and acclimation of photosynthesis to heat stress is closely correlated with activation of ribulose-1,5-bisphosphate carboxylase/oxygenase. Plant Physiol. 1999;120:173–82.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sharkey TD. Effects of moderate heat stress on photosynthesis: importance of thylakoid reactions, rubisco deactivation, reactive oxygen species, and thermotolerance provided by isoprene. Plant Cell Environ. 2005;28:269–77.
Article
CAS
Google Scholar
Bita CE, Gerats T. Plant tolerance to high temperature in a changing environment: scientific fundamentals and production of heat stress-tolerant crops. Front Plant Sci. 2013;4:273.
Article
PubMed
PubMed Central
Google Scholar
Hofmann NR. The plasma membrane as first responder to heat stress. Plant Cell. 2009;21:2544.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sharkey TD, Zhang R. High temperature effects on electron and proton circuits of photosynthesis. J Integr Plant Biol. 2010;52:712–22.
Article
CAS
PubMed
Google Scholar
Suwa R, Hakata H, Hara H, El-Shemy HA, Adu-Gyamfi JJ, Nguyen NT, et al. High temperature effects on photosynthate partitioning and sugar metabolism during ear expansion in maize (Zea mays L.) genotypes. Plant Physiol Biochem. 2010;48:124–30.
Article
CAS
PubMed
Google Scholar
Pressman E, Harel D, Zamski E, Shaked R, Althan L, Rosenfeld K, et al. The effect of high temperatures on the expression and activity of sucrose-cleaving enzymes during tomato ( Lycopersicon esculentum) anther development. J Hortic Sci Biotechnol. 2006;81:341–8.
Article
Google Scholar
Kaushal N, Awasthi R, Gupta K, Gaur P, Siddique KHM, Nayyar H. Heat-stress-induced reproductive failures in chickpea (Cicer arietinum) are associated with impaired sucrose metabolism in leaves and anthers. Funct Plant Biol. 2013;40:1334.
Article
CAS
PubMed
Google Scholar
Kumar S, Prakash P, Kumar S, Srivastava K. Role of pollen starch and soluble sugar content on fruit set in tomato under heat stress. Sabrao J Breed Genet. 2015;47:406–12.
Google Scholar
Pressman E, Peet MM, Pharr DM. The effect of heat stress on tomato pollen characteristics is associated with changes in carbohydrate concentration in the developing anthers. Ann Bot. 2002;90:631–6.
Article
CAS
PubMed
PubMed Central
Google Scholar
Driedonks N, Xu J, Peters JL, Park S, Rieu I. Multi-level interactions between heat shock factors, heat shock proteins, and the redox system regulate acclimation to heat. Front Plant Sci. 2015;6:999.
Article
PubMed
PubMed Central
Google Scholar
Schöffl F, Prändl R, Reindl A. Regulation of the heat-shock response. Plant Physiol. 1998;117:1135–41.
Article
PubMed
PubMed Central
Google Scholar
Miller G, Mittler R. Could heat shock transcription factors function as hydrogen peroxide sensors in plants? Ann Bot. 2006;98:279–88.
Article
CAS
PubMed
PubMed Central
Google Scholar
Crawford AJ, McLachlan DH, Hetherington AM, Franklin KA. High temperature exposure increases plant cooling capacity. Curr Biol. 2012;22:R396–7.
Article
CAS
PubMed
Google Scholar
Bitocchi E, Nanni L, Bellucci E, Rossi M, Giardini A, Zeuli PS, et al. Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data. Proc Natl Acad Sci U S A. 2012;109:E788–96.
Article
CAS
PubMed
PubMed Central
Google Scholar
Schmutz J, McClean PE, Mamidi S, Wu GA, Cannon SB, Grimwood J, et al. A reference genome for common bean and genome-wide analysis of dual domestications. Nat Genet. 2014;46:707–13.
Article
CAS
PubMed
PubMed Central
Google Scholar
Gepts P, Osborn TC, Rashka K, Bliss FA. Phaseolin-protein variability in wild forms and landraces of the common bean (Phaseolus vulgaris): evidence for multiple centers of domestication. Econ Bot. 1986;40:451–68.
Article
CAS
Google Scholar
Gepts P, Bliss FA. Dissemination pathways of common bean (Phaseolus vulgaris, Fabaceae) deduced from phaseolin electrophoretic variability. II Europe and Africa Econ Bot. 1988;42:86–104.
Google Scholar
Wallace DH. Adaptation of Phaseolus to different environments. In: Summmerfield RJ, Banting A, editors. Advances in legume science. Kew: Royal Botanic Gardens; 1980. p. 349–57.
Google Scholar
Rainey KM, Griffiths PD. Inheritance of heat tolerance during reproductive development in snap bean (Phaseolus vulgaris L.). J Am Soc Hortic Sci. 2005;130:700–6.
Article
Google Scholar
Gross Y, Kigel J. Differential sensitivity to high temperature of stages in the reproductive development of common bean (Phaseolus vulgaris L.). F Crop Res. 1994;36:201–12.
Article
Google Scholar
Porch TG, Jahn M. Effects of high-temperature stress on microsporogenesis in heat-sensitive and heat-tolerant genotypes of Phaseolus vulgaris. Plant Cell Environ. 2001;24:723–31.
Article
Google Scholar
Shonnard GC, Gepts P. Genetics of heat tolerance during reproductive development in common bean. Crop Sci. 1994;34:1168.
Article
Google Scholar
Cichy KA, Porch TG, Beaver JS, Cregan P, Fourie D, Glahn RP, et al. A Phaseolus vulgaris diversity panel for andean bean improvement. Crop Sci. 2015;55:2149–60.
Article
CAS
Google Scholar
Baiges S, Beaver JS, Miklas PN, Rosas JC. Evaluation and selection of dry beans for heat tolerance. Ann Rep Bean Improv Coop. 1996;39:88–9.
Google Scholar
Mukankusi C, Raatz B, Nkalubo S, Berhanu F, Binagwa P, Kilango M, et al. Genomics, genetics and breeding of common bean in Africa: a review of tropical legume project. Plant Breed. 2018. p. 1–14.
Román-Aviles B, Beaver JS. Inheritance of heat tolerance in common bean of Andean origin. J Agrie Univ PR. 2003;87:113–21.
Google Scholar
Porch TG, Smith JR, Beaver JS, Griffiths PD, Canaday CH. TARS-HT1 and TARS-HT2 heat-tolerant dry bean germplasm. HortScience. 2010;45:1278–80.
Article
Google Scholar
Urban J, Ingwers MW, McGuire MA, Teskey RO. Increase in leaf temperature opens stomata and decouples net photosynthesis from stomatal conductance in Pinus taeda and Populus deltoides x nigra. J Exp Bot. 2017;68:1757–67.
Article
CAS
PubMed
PubMed Central
Google Scholar
Ruan Y-L, Patrick JW, Bouzayen M, Osorio S, Fernie AR. Molecular regulation of seed and fruit set. Trends Plant Sci. 2012;17:656–65.
Article
CAS
PubMed
Google Scholar
Koonjul PK, Minhas JS, Nunes C, Sheoran IS, Saini HS. Selective transcriptional down-regulation of anther invertases precedes the failure of pollen development in water-stressed wheat. J Exp Bot. 2004;56:179–90.
PubMed
Google Scholar
Oliver SN, Dennis ES, Dolferus R. ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice. Plant Cell Physiol. 2007;48:1319–30.
Article
CAS
PubMed
Google Scholar
Boyer JS. Leaf enlargement and metabolic rates in corn, soybean, and sunflower at various leaf water potentials. Plant Physiol. 1970;46:233–5.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kramer PJ, Boyer JS. Water relations of plants and soils. San Diego: Academic Press, INC; 1995.
Google Scholar
Li X, Lawas LMF, Malo R, Glaubitz U, Erban A, Mauleon R, et al. Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. Plant Cell Environ. 2015;38:2171–92.
Article
CAS
PubMed
Google Scholar
Firon N, Shaked R, Peet MM, Pharr D, Zamski E, Rosenfeld K, et al. Pollen grains of heat tolerant tomato cultivars retain higher carbohydrate concentration under heat stress conditions. Sci Hortic (Amsterdam). 2006;109:212–7.
Article
CAS
Google Scholar
Braun DM, Slewinski TL. Genetic control of carbon partitioning in grasses: roles of sucrose transporters and tie-dyed loci in phloem loading. Plant Physiol. 2009;149:71–81.
Article
CAS
PubMed
PubMed Central
Google Scholar
Phan TTT, Ishibashi Y, Miyazaki M, Tran HT, Okamura K, Tanaka S, et al. High temperature-induced repression of the rice sucrose transporter (OsSUT1) and starch synthesis-related genes in sink and source organs at milky ripening stage causes chalky grains. J Agron Crop Sci. 2013;199:178–88.
Article
CAS
Google Scholar
Mangelsen E, Kilian J, Harter K, Jansson C, Wanke D, Sundberg E. Transcriptome analysis of high-temperature stress in developing barley caryopses: early stress responses and effects on storage compound biosynthesis. Mol Plant. 2011;4:97–115.
Article
CAS
PubMed
Google Scholar
Miyazaki M, Araki M, Okamura K, Ishibashi Y, Yuasa T, Iwaya-Inoue M. Assimilate translocation and expression of sucrose transporter, OsSUT1, contribute to high-performance ripening under heat stress in the heat-tolerant rice cultivar Genkitsukushi. J Plant Physiol. 2013;170:1579–84.
Article
CAS
PubMed
Google Scholar
McLaughlin JE, Boyer JS. Sugar-responsive gene expression, invertase activity, and senescence in aborting maize ovaries at low water potentials. Ann Bot. 2004;94:675–89.
Article
CAS
PubMed
PubMed Central
Google Scholar
Li Z, Palmer WM, Martin AP, Wang R, Rainsford F, Jin Y, et al. High invertase activity in tomato reproductive organs correlates with enhanced sucrose import into, and heat tolerance of, young fruit. J Exp Bot. 2012;63:1155–66.
Article
CAS
PubMed
Google Scholar
Kossmann J, Lloyd J. Understanding and influencing starch biochemistry. Crit Rev Biochem Mol Biol. 2000;35:141–96.
CAS
PubMed
Google Scholar
Scheidig A, Fröhlich A, Schulze S, Lloyd JR, Kossmann J. Downregulation of a chloroplast-targeted beta-amylase leads to a starch-excess phenotype in leaves. Plant J. 2002;30:581–91.
Article
CAS
PubMed
Google Scholar
Monroe JD, Storm AR, Badley EM, Lehman MD, Platt SM, Saunders LK, et al. β-Amylase1 and β-amylase3 are plastidic starch hydrolases in Arabidopsis that seem to be adapted for different thermal, pH, and stress conditions. Plant Physiol. 2014;166:1748–63.
Article
PubMed
PubMed Central
CAS
Google Scholar
Wang Q, Monroe J, Sjölund RD. Identification and characterization of a phloem-specific beta-amylase. Plant Physiol. 1995;109:743–50.
Article
CAS
PubMed
PubMed Central
Google Scholar
Dreier W, Schnarrenberger C, Börner T. Light- and stress-dependent enhancement of amylolytic activities in white and green barley leaves: β-amylases are stress-induced proteins. J Plant Physiol. 1995;145:342–8.
Article
CAS
Google Scholar
Kaplan F, Guy CL. Beta-amylase induction and the protective role of maltose during temperature shock. Plant Physiol. 2004;135:1674–84.
Article
CAS
PubMed
PubMed Central
Google Scholar
Baroja-Fernández E, Muñoz FJ, Li J, Bahaji A, Almagro G, Montero M, et al. Sucrose synthase activity in the sus1/sus2/sus3/sus4 Arabidopsis mutant is sufficient to support normal cellulose and starch production. Proc Natl Acad Sci U S A. 2012;109:321–6.
Article
PubMed
Google Scholar
Ruan Y-L, Jin Y, Yang Y-J, Li G-J, Boyer JS. Sugar input, metabolism, and signaling mediated by invertase: roles in development, yield potential, and response to drought and heat. Mol Plant. 2010;3:942–55.
Article
CAS
PubMed
Google Scholar
Goldschmidt EE, Huber SC. Regulation of photosynthesis by end-product accumulation in leaves of plants storing starch, sucrose, and hexose sugars. Plant Physiol. 1992;99:1443–8.
Article
CAS
PubMed
PubMed Central
Google Scholar
Koch K. Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant development. Curr Opin Plant Biol. 2004;7:235–46.
Article
CAS
PubMed
Google Scholar
Rolland F, Baena-Gonzalez E, Sheen J. Sugar sensing and signaling in plants: conserved and novel mechanisms. Annu Rev Plant Biol. 2006;57:675–709.
Article
CAS
PubMed
Google Scholar
Lastdrager J, Hanson J, Smeekens S. Sugar signals and the control of plant growth and development. J Exp Bot. 2014;65:799–807.
Article
CAS
PubMed
Google Scholar
Lawlor DW. Carbon and nitrogen assimilation in relation to yield: mechanisms are the key to understanding production systems. J Exp Bot. 2002;53:773–87.
Article
CAS
PubMed
Google Scholar
Huang NC, Liu KH, Lo HJ, Tsay YF. Cloning and functional characterization of an Arabidopsis nitrate transporter gene that encodes a constitutive component of low-affinity uptake. Plant Cell. 1999;11:1381–92.
Article
CAS
PubMed
PubMed Central
Google Scholar
Fan S-C, Lin C-S, Hsu P-K, Lin S-H, Tsay Y-F. The Arabidopsis nitrate transporter NRT1.7, expressed in phloem, is responsible for source-to-sink remobilization of nitrate. Plant Cell. 2009;21:2750–61.
Article
CAS
PubMed
PubMed Central
Google Scholar
Andrews M, Raven JA, Lea PJ. Do plants need nitrate? The mechanisms by which nitrogen form affects plants. Ann Appl Biol. 2013;163:174–99.
Article
CAS
Google Scholar
Davenport S, Le Lay P, Sanchez-Tamburrrino JP. Nitrate metabolism in tobacco leaves overexpressing Arabidopsis nitrite reductase. Plant Physiol Biochem. 2015;97:96–107.
Article
CAS
PubMed
Google Scholar
Ladenstein R, Ren B. Protein disulfides and protein disulfide oxidoreductases in hyperthermophiles. FEBS J. 2006;273:4170–85.
Article
CAS
PubMed
Google Scholar
Ohama N, Sato H, Shinozaki K, Yamaguchi-Shinozaki K. Transcriptional regulatory network of plant heat stress response. Trends Plant Sci. 2017;22:53–65.
Article
CAS
PubMed
Google Scholar
von Koskull-Döring P, Scharf K-D, Nover L. The diversity of plant heat stress transcription factors. Trends Plant Sci. 2007;12:452–7.
Article
CAS
Google Scholar
Charng YY, Liu HC, Liu NY, Chi WT, Wang CN, Chang SH, et al. A heat-inducible transcription factor, HsfA2, is required for extension of acquired thermotolerance in Arabidopsis. Plant Physiol. 2006;143:251–62.
Article
PubMed
CAS
Google Scholar
Laemke J, Brzezinka K, Altmann S, Baurle I. A hit-and-run heat shock factor governs sustained histone methylation and transcriptional stress memory. EMBO J. 2016;35:162–75.
Article
CAS
Google Scholar
Vercruyssen L, Tognetti VB, Gonzalez N, Van Dingenen J, De Milde L, Bielach A, et al. GROWTH REGULATING FACTOR5 stimulates Arabidopsis chloroplast division, photosynthesis, and leaf longevity. Plant Physiol. 2015;167:817–32.
Article
CAS
PubMed
PubMed Central
Google Scholar
Chao L-M, Liu Y-Q, Chen D-Y, Xue X-Y, Mao Y-B, Chen X-Y. Arabidopsis transcription factors SPL1 and SPL12 confer plant thermotolerance at reproductive stage. Mol Plant. 2017;10:735–48.
Article
CAS
PubMed
Google Scholar
Zhong L, Zhou W, Wang H, Ding S, Lu Q, Wen X, et al. Chloroplast small heat shock protein HSP21 interacts with plastid nucleoid protein pTAC5 and is essential for chloroplast development in Arabidopsis under heat stress. Plant Cell. 2013;25:2925–43.
Article
CAS
PubMed
PubMed Central
Google Scholar
Heckathorn SA, Downs CA, Sharkey TD, Coleman JS. The small, methionine-rich chloroplast heat-shock protein protects photosystem II electron transport during heat stress. Plant Physiol. 1998;116:439–44.
Article
CAS
PubMed
PubMed Central
Google Scholar
Dall’Osto L, Cazzaniga S, North H, Marion-Poll A, Bassi R. The Arabidopsis aba4-1 mutant reveals a specific function for neoxanthin in protection against photooxidative stress. Plant Cell Online. 2007;19:1048–64.
Article
CAS
Google Scholar
de Bianchi S, Betterle N, Kouril R, Cazzaniga S, Boekema E, Bassi R, et al. Arabidopsis mutants deleted in the light-harvesting protein Lhcb4 have a disrupted photosystem II macrostructure and are defective in photoprotection. Plant Cell. 2011;23:2659–79.
Article
PubMed
PubMed Central
CAS
Google Scholar
Llorente F, López-Cobollo RM, Catalá R, Martínez-Zapater JM, Salinas J. A novel cold-inducible gene from Arabidopsis, RCI3 , encodes a peroxidase that constitutes a component for stress tolerance. Plant J. 2002;32:13–24.
Article
CAS
PubMed
Google Scholar
Lichtenthaler HK, Wellburn AR. Determinations of total carotenoids and chlorophylls a and b of leaf extracts in different solvents. Biochem Soc Trans. 1983;11:591–2.
Article
CAS
Google Scholar
Schneider CA, Rasband WS, Eliceiri KW. NIH image to ImageJ: 25 years of image analysis. Nat Methods. 2012;9:671–5.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kim D, Langmead B, Salzberg SL. HISAT: a fast spliced aligner with low memory requirements. Nat Meth. 2015;12:357–60.
Article
CAS
Google Scholar
Anders S, Pyl PT, Huber W. HTSeq--a Python framework to work with high-throughput sequencing data. Bioinformatics. 2015;31:166–9.
Article
CAS
PubMed
Google Scholar
R Development Core Team R. R: a language and environment for statistical computing. R Foundation for Statistical Computing. 2011;1 2.11.1.
Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W, et al. limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Res. 2015;43:e47.
Article
PubMed
PubMed Central
CAS
Google Scholar
Law CW, Chen Y, Shi W, Smyth GK. voom: precision weights unlock linear model analysis tools for RNA-seq read counts. Genome Biol. 2014;15:R29.
Article
PubMed
PubMed Central
CAS
Google Scholar
Alexa A, Rahnenfuhrer J. topGO: Enrichment analysis for gene ontology. 2016;:R package version 2.26.0.
Google Scholar
Thimm O, Bläsing O, Gibon Y, Nagel A, Meyer S, Krüger P, et al. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J. 2004;37:914–39.
Article
CAS
PubMed
Google Scholar