Pimenov MG, Leonov MV. The genera of the Umbelliferae: a nomenclator. Kew: Royal Botanic Gardens; 1993.
Google Scholar
Sina AA. Kanon vrachebnoy nauki (Canon). In: Zaxidov TZ, editor. Book. 1. Tashkent: Academy of Sciences of the UzSSR; 1954. p. 549.
Shen GM. Chinese herbal medicine series: Ferula. Urumqi: Xinjiang people’s publishing house; 1986.
Google Scholar
Nazari ZE, Iranshahi M. Biologically active sesquiterpene coumarins from Ferula species. Phytother Res. 2011;25(3):315–23.
Article
CAS
PubMed
Google Scholar
Mahendra P, Bisht S. Ferula asafoetida: Traditional uses and pharmacological activity. Pharmacogn Rev. 2012;6(12):141–6.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ajani Y, Ajani A, Cordes JM, Watson MF, Downie SR. Phylogenetic analysis of nrDNA ITS sequences reveals relationships within five groups of Iranian Apiaceae subfamily Apioideae. Taxon. 2008;57(2):383–401.
Google Scholar
Kurzyna-Młynik R, Oskolski AA, Downie SR, Kopacz R, Wojewódzka A, Spalik K. Phylogenetic position of the genus Ferula (Apiaceae) and its placement in tribe Scandiceae as inferred from nrDNA ITS sequence variation. Plant Syst Evol. 2008;274(1–2):47–66.
Article
CAS
Google Scholar
Safina LK, Ostroumova TA, Pimenov MG. Carpology of the species of Ferula subgen. Merwia(Umbelliferae-Apioideae) and some taxonomic implications. Nord J Bot. 2015;33(2):140–50.
Article
Google Scholar
Boissier PE. Flora orientalis sive, enumeratio plantarum in Oriente a Graecia et Aegypto ad Indiae fines hucusque observatae 2. Genève, Basel & Lyon: H.Georg; 1872. p. 1159.
Drude CGO. Umbelliferae. In: Engler A, Prantl K, editors. Die natürlichen Pflanzenfamilien, vol. 3. Leipzig: Verlag von Wilhelm Engelman (Druck von Breitkopf & Härtel in Leipzig); 1898. p. 63–250.
Korovin EP. Generis Ferula (Tourn.) L. monographia illustrata. Tashkent: Academiae Scientiarum UzRSS; 1947. p. 91.
Chamberlain DF, Rechinger KH. Ferula L. In: Hedge IC, Lamond JM, Rechinger KH, editors. Umbelliferae, Flora Iranica, vol. 162. Graz: Akademische Druck- und Verlagsanstalt; 1987. p. 387–426.
Safina LK, Pimenov MG. The carpoanatomical features of the species of the genus Ferula of the subgenus Peucedanoides (Apiaceae) in connection with the systematics of the genus. Bot Zhurn (Leningrad). 1983;68:730–9.
Google Scholar
Safina LK, Pimenov MG. Feruly Kazakhstana. Alma-ata: Nauka Kazakhskoĭ SSR; 1984. p. 110.
Safina LK, Pimenov MG. Carpology of the species of type subgenus of the genus Ferula and some problems of their systematics. Feddes Repertorium. 2008;101(3–4):135–51.
Google Scholar
Panahi M, Banasiak L, Piwczyński M, Puchałka R, Kanani MR, Oskolski AA, Modnicki D, Miłobędzka A, Spalik K. Taxonomy of the traditional medicinal plant genus Ferula (Apiaceae) is confounded by incongruence between nuclear rDNA and plastid DNA. Bot J Linn Soc. 2018;188(2):173–89.
Article
Google Scholar
Ledebour CF, Bunge A, Meyer CA. Flora Altaica. Berolini: G. Reimeri; 1829. p. 197–206.
von Bunge A. Beitrag zur kenntniss der flor Russlands und der steppen Central-Asiens. St. Petersburg: Kaiserliche Akademie der Wissenschaften; 1851. p. 359.
Korovin EP. Ferula L. In: Schischkin BK, editor. Flora of the USSR. Moscow and Leningrad: Akad. nauk SSSR; 1951. p. 62–214.
Google Scholar
She ML, Pu FD, Pan ZH, Watson MF, Cannon JFM, Holmes-Smith I, et al. Apiaceae (Umbelliferae). In: Wu ZY, Raven RH, editors. Flora of China. Beijing and St. Louis: Science Press and Missouri Botanical garden Press; 2005. p. 1–205.
Shen GM. Apiaceae (Umbelliferae). In: Shen GM, editor. Flora Xinjiangensis. Urumqi: Xinjiang Science & Technology Publishing House; 2011. p. 464–621.
Kuntze O. Plantae orientali-rossicae. Trudy Imp: S.-Peterburgsk. Bot. Sada. 1887;10:35–262.
Tojibaev KSh, Sennikov AN, Lazkov GA, Jang GG, Choi HJ, Chang KS, et al. Checklist of vascular plants of the Tian-Shan Mountain System. Pocheon: Korea National Arboretum; 2021. p. 607.
Korovin EP. The new genera and species of Umbelliferae from Kazakhstan flora. Trudy Instituta Botaniki: Akademiya Nauk Kazakhskoi SSR. 1962;13:242–62.
Pimenov MG, Kirillina NA. The carpology of Soranthus, Ladyginia, Eriosynaphe and Schumannia in connection with the problem of the taxonomic limits of the genus Ferula (Apiaceae). Botanicheskii Zhurnal. 1980;65:1756–66.
Google Scholar
Govaerts R, Nic Lughadha E, Black N, Turner R, Paton A. The World Checklist of Vascular Plants, a continuously updated resource for exploring global plant diversity. Sci Data. 2021;8(1):215.
Article
PubMed
PubMed Central
Google Scholar
Qin XM, Shen KM. Taxonomic studies on the Genus Ferula and its close genera in Xinjiang. Arid Zone Res. 1990;7(4):23–33.
Google Scholar
Hui H, Liu QX, Liu MH. Study on serum classification and genetic relationship of Ferula of Peucedaneae subtribe Ferulinae of Apiaceae in China. J Syst Evol. 2003;41(4):369–80.
Google Scholar
Panahi M, Banasiak Ł, Piwczyński M, Puchałka R, Oskolski AA, Spalik K. Phylogenetic relationships among Dorema, Ferula and Leutea (Apiaceae: Scandiceae: Ferulinae) inferred from nrDNA ITS and cpDNA noncoding sequences. Taxon. 2015;64(4):770–83.
Article
Google Scholar
Corriveau JL, Coleman AW. Rapid Screening Method to Detect Potential Biparental Inheritance of Plastid DNA and Results for over 200 Angiosperm Species. Am J Bot. 1988;75(10):1443–58.
Article
Google Scholar
Jansen RK, Raubeson LA, Boore JL, dePamphilis CW, Chumley TW, Haberle RC, Wyman SK, Alverson AJ, Peery R, Herman SJ, et al. Methods for obtaining and analyzing whole chloroplast genome sequences. Methods Enzymol. 2005;395:348–84.
Article
CAS
PubMed
Google Scholar
Ravi V, Khurana JP, Tyagi AK, Khurana P. An update on chloroplast genomes. Plant Syst Evol. 2007;271(1–2):101–22.
Google Scholar
Wicke S, Schneeweiss GM, dePamphilis CW, Muller KF, Quandt D. The evolution of the plastid chromosome in land plants: gene content, gene order, gene function. Plant Mol Biol. 2011;76(3–5):273–97.
Article
CAS
PubMed
PubMed Central
Google Scholar
Yang JB, Tang M, Li HT, Zhang ZR, Li DZ. Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses. BMC Evol Biol. 2013;13:84.
Article
CAS
PubMed
PubMed Central
Google Scholar
Dong W, Liu H, Xu C, Zuo Y, Chen Z, Zhou S. A chloroplast genomic strategy for designing taxon specific DNA mini-barcodes: a case study on ginsengs. BMC Genet. 2014;15:138.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ma PF, Zhang YX, Zeng CX, Guo ZH, Li DZ. Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (poaceae). Syst Biol. 2014;63(6):933–50.
Article
PubMed
Google Scholar
Coissac E, Hollingsworth PM, Lavergne S, Taberlet P. From barcodes to genomes: extending the concept of DNA barcoding. Mol Ecol. 2016;25(7):1423–8.
Article
CAS
PubMed
Google Scholar
Hollingsworth PM, Li DZ, van der Bank M, Twyford AD. Telling plant species apart with DNA: from barcodes to genomes. Philos Trans R Soc Lond B Biol Sci. 2016;371(1702):20150338.
Article
PubMed
PubMed Central
CAS
Google Scholar
Huang Y, Li X, Yang Z, Yang C, Yang J, Ji Y. Analysis of Complete Chloroplast Genome Sequences Improves Phylogenetic Resolution in Paris (Melanthiaceae). Front Plant Sci. 2016;7:1797.
PubMed
PubMed Central
Google Scholar
Xie DF, Yu Y, Deng YQ, Li J, Liu HY, Zhou SD, He XJ. Comparative Analysis of the Chloroplast Genomes of the Chinese Endemic Genus Urophysa and Their Contribution to Chloroplast Phylogeny and Adaptive Evolution. Int J Mol Sci. 2018;19(7):1847.
Article
PubMed Central
CAS
Google Scholar
Liang D, Wang H, Zhang J, Zhao Y, Wu F. Complete Chloroplast Genome Sequence of Fagus longipetiolata Seemen (Fagaceae): Genome Structure, Adaptive Evolution, and Phylogenetic Relationships. Life (Basel). 2022;12(1):92.
CAS
PubMed Central
Google Scholar
Wang N, Chen S, Xie L, Wang L, Feng Y, Lv T, Fang Y, Ding H. The complete chloroplast genomes of three Hamamelidaceae species: Comparative and phylogenetic analyses. Ecol Evol. 2022;12(2):e8637.
PubMed
PubMed Central
Google Scholar
Fu CN, Mo ZQ, Yang JB, Cai J, Ye LJ, Zou JY, Qin HT, Zheng W, Hollingsworth PM, Li DZ, et al. Testing genome skimming for species discrimination in the large and taxonomically difficult genus Rhododendro. Mol Ecol Resour. 2022;22(1):404–14.
Article
CAS
PubMed
Google Scholar
Goulding SE, Olmstead RG, Morden CW, Wolfe KH. Ebb and flow of the chloroplast inverted repeat. Mol Gen Genet. 1996;252(1–2):195–206.
Article
CAS
PubMed
Google Scholar
Huang J-L, Sun G-L, Zhang D-M. Molecular evolution and phylogeny of the angiosperm ycf2 gene. J Syst Evol. 2010;48(4):240–8.
Article
Google Scholar
Zhu A, Guo W, Gupta S, Fan W, Mower JP. Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates. New Phytol. 2016;209(4):1747–56.
Article
CAS
PubMed
Google Scholar
Wen J, Xie DF, Price M, Ren T, Deng YQ, Gui LJ, Guo XL, He XJ. Backbone phylogeny and evolution of Apioideae (Apiaceae): New insights from phylogenomic analyses of plastome data. Mol Phylogenet Evol. 2021;161:107183.
Article
PubMed
Google Scholar
Gu C, Ma L, Wu Z, Chen K, Wang Y. Comparative analyses of chloroplast genomes from 22 Lythraceae species: inferences for phylogenetic relationships and genome evolution within Myrtales. BMC Plant Biol. 2019;19(1):281.
Article
PubMed
PubMed Central
CAS
Google Scholar
Liu X, Chang E-M, Liu J-F, Huang Y-N, Wang Y, Yao N, Jiang Z-P. Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Quercus bawanglingensis Huang, Li et Xing, a Vulnerable Oak Tree in China. Forests. 2019;10(7):587.
Article
Google Scholar
Kim S-C, Lee J-W, Choi B-K. Seven Complete Chloroplast Genomes from Symplocos: Genome Organization and Comparative Analysis. Forests. 2021;12(5):608.
Article
Google Scholar
Rono PC, Dong X, Yang JX, Mutie FM, Oulo MA, Malombe I, Kirika PM, Hu GW, Wang QF. Initial Complete Chloroplast Genomes of Alchemilla (Rosaceae): Comparative Analysis and Phylogenetic Relationships. Front Genet. 2020;11:560368.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wanga VO, Dong X, Oulo MA, Mkala EM, Yang JX, Onjalalaina GE, Gichua MK, Kirika PM, Gituru RW, Hu GW, et al. Complete Chloroplast Genomes of Acanthochlamys bracteata (China) and Xerophyta (Africa) (Velloziaceae): Comparative Genomics and Phylogenomic Placement. Front Plant Sci. 2021;12:691833.
Article
PubMed
PubMed Central
Google Scholar
Morton BR. Selection on the codon bias of chloroplast and cyanelle genes in different plant and algal lineages. J Mol Evol. 1998;46(4):449–59.
Article
CAS
PubMed
Google Scholar
Guisinger MM, Kuehl JV, Boore JL, Jansen RK. Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage. Mol Biol Evol. 2011;28(1):583–600.
Article
CAS
PubMed
Google Scholar
Ren T, Li ZX, Xie DF, Gui LJ, Peng C, Wen J, He XJ. Plastomes of eight Ligusticum species: characterization, genome evolution, and phylogenetic relationships. BMC Plant Biol. 2020;20(1):519.
Article
CAS
PubMed
PubMed Central
Google Scholar
Lu H, Zhao WM, Zheng Y, Wang H, Qi M, Yu XP. Analysis of synonymous codon usage bias in Chlamydia. Acta Biochim Biophys Sin (Shanghai). 2005;37(1):1–10.
Article
CAS
Google Scholar
Hassan S, Mahalingam V, Kumar V. Synonymous codon usage analysis of thirty two mycobacteriophage genomes. Adv Bioinformatics. 2009;2009:316936.
Article
CAS
Google Scholar
Li WJ, Su ZH, Yang L, Cao QM, Fengi Y. Genetic diversity of the critically endangered Ferula sinkiangensis KM Shen (Apiaceae) and the implications for conservation. Turk J Bot. 2020;44(2):145–52.
Google Scholar
Yang L, Hisoriev H, Kurbonova P, Boboev M, Bobokalonov K, Feng Y, Li W. High genetic diversity and low differentiation of endangered Ferula tadshikorum Pimenov in Tajikistan. GECCO. 2021;28:e01627.
Google Scholar
Ren T, Yang Y, Zhou T, Liu ZL. Comparative Plastid Genomes of Primula Species: Sequence Divergence and Phylogenetic Relationships. Int J Mol Sci. 2018;19(4):1050.
Article
PubMed Central
CAS
Google Scholar
Li B, Zheng Y. Dynamic evolution and phylogenomic analysis of the chloroplast genome in Schisandraceae. Sci Rep. 2018;8(1):9285.
Article
PubMed
PubMed Central
CAS
Google Scholar
Chen Y, Hu N, Wu H. Analyzing and Characterizing the Chloroplast Genome of Salix wilsonii. Biomed Res Int. 2019;2019:5190425.
PubMed
PubMed Central
Google Scholar
Khan A, Asaf S, Khan AL, Al-Harrasi A, Al-Sudairy O, AbdulKareem NM, Khan A, Shehzad T, Alsaady N, Al-Lawati A, et al. First complete chloroplast genomics and comparative phylogenetic analysis of Commiphora gileadensis and C foliacea: Myrrh producing trees. PLoS One. 2019;14(1):e0208511.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wang L, Wuyun T-n, Du H, Wang D, Cao D. Complete chloroplast genome sequences of Eucommia ulmoides: genome structure and evolution. Tree Genet Genomes. 2016;12(1):15.
Article
Google Scholar
Shen X, Wu M, Liao B, Liu Z, Bai R, Xiao S, Li X, Zhang B, Xu J, Chen S. Complete Chloroplast Genome Sequence and Phylogenetic Analysis of the Medicinal Plant Artemisia annua. Molecules. 2017;22(8):1330.
Article
PubMed Central
CAS
Google Scholar
Shen J, Li X, Chen X, Huang X, Jin S. The Complete Chloroplast Genome of Carya cathayensis and Phylogenetic Analysis. Genes (Basel). 2022;13(2):369.
Article
CAS
Google Scholar
Li W, Zhang C, Guo X, Liu Q, Wang K. Complete chloroplast genome of Camellia japonica genome structures, comparative and phylogenetic analysis. PLoS ONE. 2019;14(5):e0216645.
Article
PubMed
PubMed Central
Google Scholar
Tyagi S, Jung JA, Kim JS, Won SY. A comparative analysis of the complete chloroplast genomes of three Chrysanthemum boreale strains. PeerJ. 2020;8:e9448.
Article
PubMed
PubMed Central
CAS
Google Scholar
Hurst LD. The Ka/Ks ratio: diagnosing the form of sequence evolution. Trends Genet. 2002;18(9):486–7.
Article
PubMed
Google Scholar
Yang J, Kang GH, Pak JH, Kim SC. Characterization and Comparison of Two Complete Plastomes of Rosaceae Species (Potentilla dickinsii var. glabrata and Spiraea insularis) Endemic to Ulleung Island, Korea. Int J Mol Sci. 2020;21(14):4933.
Article
CAS
PubMed Central
Google Scholar
Dong X, Mkala EM, Mutinda ES, Yang JX, Wanga VO, Oulo MA, Onjolo VO, Hu GW, Wang QF. Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales. BMC Genomics. 2022;23(1):566.
Article
CAS
PubMed
PubMed Central
Google Scholar
Lee-Yaw JA, Grassa CJ, Joly S, Andrew RL, Rieseberg LH. An evaluation of alternative explanations for widespread cytonuclear discordance in annual sunflowers (Helianthus). New Phytol. 2019;221(1):515–26.
Article
CAS
PubMed
Google Scholar
Zhang X, Deng T, Moore MJ, Ji Y, Lin N, Zhang H, Meng A, Wang H, Sun Y, Sun H. Plastome phylogenomics of Saussurea (Asteraceae: Cardueae). BMC Plant Biol. 2019;19(1):290.
Article
PubMed
PubMed Central
Google Scholar
Timme RE, Kuehl JV, Boore JL, Jansen RK. A comparison of the first two sequenced chloroplast genomes in Asteraceae: lettuce and sunflower. United States: Lawrence Berkeley National Laboratory; 2006. p. 1–33.
Pimenov MG. Glaucoselinum section (Schischk.) M. Pimen of genus Ferula L. (Umbelliferae). Moscow, Biologicheskie nauki: Nauchnye doklady vysshei shkoly. 1983;12:74–9.
Shan RH, She ML. Flora Reipublcae Popularis Sinicae, vol. 55. Beijing: Science Press; 1979.
Google Scholar
Chen XY, Liu QX. Luteolin glycosides as taxonomic markers in Ferula and related genera. Biochem Syst Ecol. 1989;17(4):309–10.
Article
CAS
Google Scholar
Liu QX, Wu MY, Rao GX, Ye JS, Hui H. H-NMR detection of coumarin and its application in the chemical classification of Ferula. J Plant Resour Environ. 1999;8(1):46–51.
CAS
Google Scholar
Du Q, Jiang M, Sun S, Wang L, Liu S, Jiang C, Gao H, Chen H, Li Y, Wang B, et al. The complete chloroplast genome sequence of Clerodendranthus spicatus, a medicinal plant for preventing and treating kidney diseases from Lamiaceae family. Mol Biol Rep. 2022;49(4):3073–83.
Article
CAS
PubMed
Google Scholar
Meyer M, Kircher M. Illumina sequencing library preparation for highly multiplexed target capture and sequencing. Cold Spring Harb Protoc. 2010;2010(6):pdb prot5448.
Article
PubMed
Google Scholar
Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 2020;21(1):241.
Article
PubMed
PubMed Central
Google Scholar
Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 2012;19(5):455–77.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wick RR, Schultz MB, Zobel J, Holt KE. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 2015;31(20):3350–2.
Article
CAS
PubMed
PubMed Central
Google Scholar
Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics. 2012;13:715.
Article
PubMed
PubMed Central
CAS
Google Scholar
Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 2012;28(12):1647–9.
Article
PubMed
PubMed Central
Google Scholar
Lohse M, Drechsel O, Kahlau S, Bock R. OrganellarGenomeDRAW–a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res. 2013;41(Web server issue):W575-581.
Article
PubMed
PubMed Central
Google Scholar
Metsalu T, Vilo J. ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap. Nucleic Acids Res. 2015;43(W1):W566-570.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kurtz S, Choudhuri JV, Ohlebusch E, Schleiermacher C, Stoye J, Giegerich R. REPuter: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Res. 2001;29(22):4633–42.
Article
CAS
PubMed
PubMed Central
Google Scholar
Katoh K, Rozewicki J, Yamada KD. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 2019;20(4):1160–6.
Article
CAS
PubMed
Google Scholar
Darling AC, Mau B, Blattner FR, Perna NT. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 2004;14(7):1394–403.
Article
CAS
PubMed
PubMed Central
Google Scholar
Rozas J, Ferrer-Mata A, Sanchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE, Sanchez-Gracia A. DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets. Mol Biol Evol. 2017;34(12):3299–302.
Article
CAS
PubMed
Google Scholar
Capella-Gutierrez S, Silla-Martinez JM, Gabaldon T. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics. 2009;25(15):1972–3.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zhang D, Gao F, Jakovlic I, Zou H, Zhang J, Li WX, Wang GT. PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Mol Ecol Resour. 2020;20(1):348–55.
Article
PubMed
Google Scholar
Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 2014;30(9):1312–3.
Article
CAS
PubMed
PubMed Central
Google Scholar
Darriba D, Taboada GL, Doallo R, Posada D. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods. 2012;9(8):772.
Article
CAS
PubMed
PubMed Central
Google Scholar
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Hohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. MrBayes 32: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 2012;61(3):539–42.
Article
PubMed
PubMed Central
Google Scholar
Letunic I, Bork P. Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation. Nucleic Acids Res. 2021;49(W1):W293–6.
Article
CAS
PubMed
PubMed Central
Google Scholar
Rambaut A. FigTree 1.4.2 software, a graphical viewer of phylogenetic trees. Edinburgh: Institute of Evolutionary Biology University of Edinburgh; 2014.