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6358 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 56 of 128

  1. The typical single-chromosome mitochondrial (mt) genome of animals has fragmented into multiple minichromosomes in the lineage Mitodivisia, which contains most of the parasitic lice of eutherian mammals. These...

    Authors: Wen-Ge Dong, Yalun Dong, Xian-Guo Guo and Renfu Shao
    Citation: BMC Genomics 2021 22:598
    Content type: Research Published on:

  2. Piwi-interacting RNAs (piRNAs) are a recently discovered class of small non-coding RNAs whose best-understood function is to repress mobile element (ME) activity in animal germline. To date, nearly all piRNA s...

    Authors: Hongseok Ha, Jimin Song, Shuoguo Wang, Aurélie Kapusta, Cédric Feschotte, Kevin C Chen and Jinchuan Xing
    Citation: BMC Genomics 2014 15:545
    Content type: Research article Published on:

  3. The interaction of eukaryotic host and prokaryotic pathogen cells is linked to specific changes in the cellular proteome, and consequently to infection-related gene expression patterns of the involved cells. T...

    Authors: Fabian Afonso-Grunz, Klaus Hoffmeier, Sören Müller, Alexander J Westermann, Björn Rotter, Jörg Vogel, Peter Winter and Günter Kahl
    Citation: BMC Genomics 2015 16:323
    Content type: Research article Published on:

  4. Identification of molecular classifiers from genome-wide gene expression analysis is an important practice for the investigation of biological systems in the post-genomic era - and one with great potential for...

    Authors: Lucas B Edelman, Giuseppe Toia, Donald Geman, Wei Zhang and Nathan D Price
    Citation: BMC Genomics 2009 10:583
    Content type: Research article Published on:

  6. Since its discovery around deep sea hydrothermal vents of the Galapagos Rift about 30 years ago, the chemoautotrophic symbiosis between the vestimentiferan tubeworm Riftia pachyptila and its symbiotic sulfide-oxi...

    Authors: Sophie Sanchez, Stéphane Hourdez and François H Lallier
    Citation: BMC Genomics 2007 8:337
    Content type: Research article Published on:

  7. The actin cytoskeleton plays a crucial role in supporting and regulating numerous cellular processes. Mutations or alterations in the expression levels affecting the actin cytoskeleton system or related regula...

    Authors: Jean Muller, André Mehlen, Guillaume Vetter, Mikalai Yatskou, Arnaud Muller, Frédéric Chalmel, Olivier Poch, Evelyne Friederich and Laurent Vallar
    Citation: BMC Genomics 2007 8:294
    Content type: Methodology article Published on:

  8. The fish-hunting cone snail, Conus geographus, is the deadliest snail on earth. In the absence of medical intervention, 70% of human stinging cases are fatal. Although, its venom is known to consist of a cocktail...

    Authors: Hao Hu, Pradip K Bandyopadhyay, Baldomero M Olivera and Mark Yandell
    Citation: BMC Genomics 2012 13:284
    Content type: Research article Published on:

  9. Tibetan cashmere goats are served as a valuable model for high altitude adaptation and hypoxia complications related studies, while the cashmere produced by these goats is an important source of income for the...

    Authors: Bingru Zhao, Cuiling Wu, Abdul Sammad, Zhen Ma, Langda Suo, Yujiang Wu and Xuefeng Fu
    Citation: BMC Genomics 2022 23:191
    Content type: Research Published on:

  10. Auxin signaling is vital for plant growth and development, and plays important role in apical dominance, tropic response, lateral root formation, vascular differentiation, embryo patterning and shoot elongatio...

    Authors: Hongyan Xing, Ramesh N Pudake, Ganggang Guo, Guofang Xing, Zhaorong Hu, Yirong Zhang, Qixin Sun and Zhongfu Ni
    Citation: BMC Genomics 2011 12:178
    Content type: Research article Published on:

  11. Cross-species gene-expression comparison is a powerful tool for the discovery of evolutionarily conserved mechanisms and pathways of expression control. The usefulness of cDNA microarrays in this context is th...

    Authors: James Adjaye, Ralf Herwig, Doris Herrmann, Wasco Wruck, Alia BenKahla, Thore C Brink, Monika Nowak, Joseph W Carnwath, Claus Hultschig, Heiner Niemann and Hans Lehrach
    Citation: BMC Genomics 2004 5:83
    Content type: Research article Published on:

  13. Cowpea [Vigna unguiculata (L.) Walp] exhibits a considerable variation in leaf shape. Although cowpea is mostly utilized as a dry grain and animal fodder crop, cowpea leaves are also used as a high-protein pot he...

    Authors: Marti Pottorff, Jeffrey D Ehlers, Christian Fatokun, Philip A Roberts and Timothy J Close
    Citation: BMC Genomics 2012 13:234
    Content type: Research article Published on:

  14. The Orchidaceae family is one of the most diverse among flowering plants and serves as an important research model for plant evolution, especially “evo-devo” study on floral organs. Recently, sequencing of sev...

    Authors: Weixiong Zhang, Guoqiang Zhang, Peng Zeng, Yongqiang Zhang, Hao Hu, Zhongjian Liu and Jing Cai
    Citation: BMC Genomics 2021 22:536
    Content type: Research article Published on:

  16. The murine discs large homolog 2 (DLG2; post synaptic density 93 (PSD-93); Chapsyn-110) is a member of the membrane-associated guanylate kinase (MAGUK) protein family involved in receptor assembly and associat...

    Authors: Shafaqat Ali, Alexander Hoven, Regine J. Dress, Heiner Schaal, Judith Alferink and Stefanie Scheu
    Citation: BMC Genomics 2018 19:194
    Content type: Research article Published on:

  17. It is well-known that methylation changes occur as humans age, however, understanding how age-related changes in DNA methylation vary by sex is lacking. In this study, we characterize the effect of age on DNA ...

    Authors: Rick J. Jansen, Lin Tong, Maria Argos, Farzana Jasmine, Muhammad Rakibuz-Zaman, Golam Sarwar, Md. Tariqul Islam, Hasan Shahriar, Tariqul Islam, Mahfuzar Rahman, Md. Yunus, Muhammad G. Kibriya, John A. Baron, Habibul Ahsan and Brandon L. Pierce
    Citation: BMC Genomics 2019 20:704
    Content type: Research article Published on:

  18. Cucurbit yellow stunting disorder virus (CYSDV; genus Crinivirus, Closteroviridae) is transmitted in a semipersistent manner by the whitefly, Bemisia tabaci, and is efficiently transmitted by the widely prevalent...

    Authors: Navneet Kaur, Wenbo Chen, Zhangjun Fei and William M. Wintermantel
    Citation: BMC Genomics 2019 20:654
    Content type: Research article Published on:

  20. Irinotecan (SN38) and oxaliplatin are chemotherapeutic agents used in the treatment of colorectal cancer. However, the frequent development of resistance to these drugs represents a considerable challenge in t...

    Authors: Xue Lin, Jan Stenvang, Mads Heilskov Rasmussen, Shida Zhu, Niels Frank Jensen, Line S Tarpgaard, Guangxia Yang, Kirstine Belling, Claus Lindbjerg Andersen, Jian Li, Lars Bolund and Nils Brünner
    Citation: BMC Genomics 2015 16:404
    Content type: Research article Published on:

  21. The highly aggressive pathogenic fungus Ophiostoma novo-ulmi continues to be a serious threat to the American elm (Ulmus americana) in North America. Extensive studies have been conducted in North America to unde...

    Authors: William Hintz, Michael Pinchback, Paul de la Bastide, Steven Burgess, Volker Jacobi, Richard Hamelin, Colette Breuil and Louis Bernier
    Citation: BMC Genomics 2011 12:431
    Content type: Research article Published on:

  22. The Bovinae subfamily incorporates an array of antelope, buffalo and cattle species. All of the members of this subfamily have diverged recently. Not surprisingly, a number of phylogenetic studies from molecul...

    Authors: Sean MacEachern, John McEwan and Mike Goddard
    Citation: BMC Genomics 2009 10:177
    Content type: Research article Published on:

  23. Auxin is essential for plant growth and development. Although substantial progress has been made in understanding auxin pathways in model plants such as Arabidopsis and rice, little is known in moso bamboo whi...

    Authors: Wenjia Wang, Lianfeng Gu, Shanwen Ye, Hangxiao Zhang, Changyang Cai, Mengqi Xiang, Yubang Gao, Qin Wang, Chentao Lin and Qiang Zhu
    Citation: BMC Genomics 2017 18:870
    Content type: Research article Published on:

  24. Revealing genetic mechanisms behind specific physiological characteristics of Saccharomyces cerevisiae from specific environments is important for industrial applications and requires precise understanding.

    Authors: Xiaowei Lu, Qun Wu, Yan Zhang and Yan Xu
    Citation: BMC Genomics 2015 16:1064
    Content type: Research article Published on:

  25. The desiccation-tolerant moss Bryum argenteum is an important component of the Biological Soil Crusts (BSCs) found in the Gurbantunggut desert. Desiccation tolerance is defined as the ability to revive from the a...

    Authors: Bei Gao, Daoyuan Zhang, Xiaoshuang Li, Honglan Yang, Yuanming Zhang and Andrew J. Wood
    Citation: BMC Genomics 2015 16:416
    Content type: Research article Published on:

  26. Pedunculate oak, Quercus robur is an abundant forest tree species that hosts a large and diverse community of beneficial ectomycorrhizal fungi (EMFs), whereby ectomycorrhiza (EM) formation is stimulated by mycorr...

    Authors: Florence Kurth, Lasse Feldhahn, Markus Bönn, Sylvie Herrmann, François Buscot and Mika T. Tarkka
    Citation: BMC Genomics 2015 16:658
    Content type: Research article Published on:

  27. Many computational programs have been developed to identify enriched regions for a single biological ChIP-seq sample. Given that many biological questions are often asked to compare the difference between two ...

    Authors: Bin Liu, Jimmy Yi, Aishwarya SV, Xun Lan, Yilin Ma, Tim HM Huang, Gustavo Leone and Victor X Jin
    Citation: BMC Genomics 2013 14(Suppl 8):S3
    Content type: Research Published on:

    This article is part of a Supplement: Volume 14 Supplement 8

  28. Widespread and more frequently occurring drought conditions are a consequence of global warming and increase the demand for tolerant crop varieties to feed the growing world population. A better understanding ...

    Authors: Nina Opitz, Anja Paschold, Caroline Marcon, Waqas Ahmed Malik, Christa Lanz, Hans-Peter Piepho and Frank Hochholdinger
    Citation: BMC Genomics 2014 15:741
    Content type: Research article Published on:

  29. Francisella tularensis is a select bio-threat agent and one of the most virulent intracellular pathogens known, requiring just a few organisms to establish an infection. Although sever...

    Authors: Anders Wallqvist, Vesna Memišević, Nela Zavaljevski, Rembert Pieper, Seesandra V. Rajagopala, Keehwan Kwon, Chenggang Yu, Timothy A. Hoover and Jaques Reifman
    Citation: BMC Genomics 2015 16:1106
    Content type: Research article Published on:

  30. Intersexual genomic conflict sometimes leads to unequal expression of paternal and maternal alleles in offspring, resulting in parent-of-origin effects. In honey bees reciprocal crosses can show strong parent-...

    Authors: Emily J. Remnant, Alyson Ashe, Paul E. Young, Gabriele Buchmann, Madeleine Beekman, Michael H. Allsopp, Catherine M. Suter, Robert A. Drewell and Benjamin P. Oldroyd
    Citation: BMC Genomics 2016 17:226
    Content type: Research article Published on:

  31. How gene duplication has influenced the evolution of gene networks is one of the core problems in evolution. Current duplication-divergence theories generally suggested that genes on the periphery of the netwo...

    Authors: Yong Huang, Ying Zheng, Zhixi Su and Xun Gu
    Citation: BMC Genomics 2009 10(Suppl 1):S14
    Content type: Research Published on:

    This article is part of a Supplement: Volume 10 Supplement 1

  32. Trypanosome gene expression is regulated almost exclusively at the post-transcriptional level, with mRNA degradation playing a decisive role. When trypanosomes are transferred from the blood of a mammal to the...

    Authors: Rafael Queiroz, Corinna Benz, Kurt Fellenberg, Jörg D Hoheisel and Christine Clayton
    Citation: BMC Genomics 2009 10:495
    Content type: Research article Published on:

  33. RNA interference (RNAi) leads to sequence specific knock-down of gene expression and has emerged as an important tool to analyse gene functions, pathway analysis and gene therapy. Although RNAi is a conserved ...

    Authors: Subhanita Ghosh, Pavan Kumar Kakumani, Ajit Kumar, Pawan Malhotra, Sunil K Mukherjee and Raj K Bhatnagar
    Citation: BMC Genomics 2014 15:775
    Content type: Research article Published on:

  34. Traditional Chinese medicine uses various herbs for the treatment of various diseases for thousands of years and it is now time to assess the characteristics and effectiveness of these medicinal plants based o...

    Authors: Yuan Yuan, Lipu Song, Minhui Li, Guiming Liu, Yanan Chu, Luyu Ma, Yuanyuan Zhou, Xiao Wang, Wei Gao, Shuangshuang Qin, Jun Yu, Xumin Wang and Luqi Huang
    Citation: BMC Genomics 2012 13:195
    Content type: Research article Published on:

  35. Trichomes, developing from the epidermis of nearly all terrestrial plants, provide good structural resistance against insect herbivores and an excellent model for studying the molecular mechanisms underlying c...

    Authors: Changxian Yang, Yanna Gao, Shenghua Gao, Gang Yu, Cheng Xiong, Jiang Chang, Hanxia Li and Zhibiao Ye
    Citation: BMC Genomics 2015 16:868
    Content type: Research article Published on:

  36. QTL cloning for the discovery of genes underlying polygenic traits has historically been cumbersome in long-lived perennial plants like Populus. Linkage disequilibrium-based association mapping has been proposed ...

    Authors: Wellington Muchero, Jianjun Guo, Stephen P DiFazio, Jin-Gui Chen, Priya Ranjan, Gancho T Slavov, Lee E Gunter, Sara Jawdy, Anthony C Bryan, Robert Sykes, Angela Ziebell, Jaroslav Klápště, Ilga Porth, Oleksandr Skyba, Faride Unda, Yousry A El-Kassaby…
    Citation: BMC Genomics 2015 16:24
    Content type: Research article Published on:

  37. Chromosomal compartmentalization plays a critical role in maintaining proper transcriptional programs in cell differentiation and oncogenesis. However, currently the prevalent method for comparative analysis o...

    Authors: Yan Kai, Nan Liu, Stuart H. Orkin and Guo-Cheng Yuan
    Citation: BMC Genomics 2023 24:614
    Content type: Research Published on:

  38. Rhabdomyosarcoma is a highly malignant soft tissue sarcoma in childhood and arises as a consequence of regulatory disruption of the growth and differentiation pathways of myogenic precursor cells. The pathogen...

    Authors: Chiara Romualdi, Cristiano De Pittà, Lucia Tombolan, Stefania Bortoluzzi, Francesca Sartori, Angelo Rosolen and Gerolamo Lanfranchi
    Citation: BMC Genomics 2006 7:287
    Content type: Research article Published on:

  39. Most studies on the paper mulberry are mainly focused on the medicated and pharmacology, fiber quality, leaves feed development, little is known about its mechanism of adaptability to abiotic stress. Physiolog...

    Authors: Xianjun Peng, Linhong Teng, Xueqing Yan, Meiling Zhao and Shihua Shen
    Citation: BMC Genomics 2015 16:898
    Content type: Research article Published on:

  40. The Sperm-coating protein/Tpx-1/Ag5/PR-1/Sc7 (SCP/TAPS) domain is found across phyla and is a major structural feature of insect allergens, mammalian sperm proteins and parasitic nematode secreted molecules. Prot...

    Authors: Iain W Chalmers, Andrew J McArdle, Richard MR Coulson, Marissa A Wagner, Ralf Schmid, Hirohisa Hirai and Karl F Hoffmann
    Citation: BMC Genomics 2008 9:89
    Content type: Research article Published on:

  41. Iron (Fe) is an essential micronutrient for plants. Utilization of Fe deficiency-tolerant rootstock is an effective strategy to prevent Fe deficiency problems in fruit trees production. Malus halliana is an apple...

    Authors: Yan-xiu Wang, Ya Hu, Yan-fang Zhu, Abdul Wahid Baloch, Xu-mei Jia and Ai-xia Guo
    Citation: BMC Genomics 2018 19:461
    Content type: Research article Published on:

  42. Aureobasidium pullulans is a black-yeast-like fungus used for production of the polysaccharide pullulan and the antimycotic aureobasidin A, and as a biocontrol agent in agriculture. It can cause opportunistic hum...

    Authors: Cene Gostinčar, Robin A Ohm, Tina Kogej, Silva Sonjak, Martina Turk, Janja Zajc, Polona Zalar, Martin Grube, Hui Sun, James Han, Aditi Sharma, Jennifer Chiniquy, Chew Yee Ngan, Anna Lipzen, Kerrie Barry, Igor V Grigoriev…
    Citation: BMC Genomics 2014 15:549
    Content type: Research article Published on:

  43. Enterohemorrhagic Escherichia coli (EHEC) are zoonotic agents associated with outbreaks worldwide. Growth of EHEC strains in ground beef could be inhibited by background microbiota that is present initially at le...

    Authors: Wessam Galia, Francoise Leriche, Stéphane Cruveiller, Cindy Garnier, Vincent Navratil, Audrey Dubost, Stéphanie Blanquet-Diot and Delphine Thevenot-Sergentet
    Citation: BMC Genomics 2017 18:574
    Content type: Research article Published on:

  44. The clinical course of chronic lymphocytic leukemia (CLL) is highly variable; some patients follow an indolent course, but others progress to a more advanced stage. The mutational status of rearranged immunogl...

    Authors: Sally Yepes, Maria Mercedes Torres and Liliana López-Kleine
    Citation: BMC Genomics 2015 16:1002
    Content type: Research article Published on:

  45. Osmotic stress is a widespread phenomenon in aquatic animal. The ability to cope with salinity stress and alkaline stress is quite important for the survival of aquatic species under natural conditions. Tilapi...

    Authors: Huanhuan Su, Dongmei Ma, Huaping Zhu, Zhigang Liu and Fengying Gao
    Citation: BMC Genomics 2020 21:110
    Content type: Research article Published on:

  46. Our understanding of the mechanisms that govern the cellular process of meiosis is limited in higher plants with polyploid genomes. Bread wheat is an allohexaploid that behaves as a diploid during meiosis. Chr...

    Authors: Wayne Crismani, Ute Baumann, Tim Sutton, Neil Shirley, Tracie Webster, German Spangenberg, Peter Langridge and Jason A Able
    Citation: BMC Genomics 2006 7:267
    Content type: Research article Published on:

  47. The marine medaka Oryzias melastigma has been demonstrated as a novel model for marine ecotoxicological studies. However, the lack of genome and transcriptome reference has largely restricted the use of O. melast...

    Authors: Keng Po Lai, Jing-Woei Li, Simon Yuan Wang, Jill Man-Ying Chiu, Anna Tse, Karen Lau, Si Lok, Doris Wai-Ting Au, William Ka-Fai Tse, Chris Kong-Chu Wong, Ting-Fung Chan, Richard Yuen-Chong Kong and Rudolf Shiu-Sun Wu
    Citation: BMC Genomics 2015 16:135
    Content type: Research article Published on:

  48. Parasitic angiosperm Orobanche crenata infection represents a major constraint for the cultivation of legumes worldwide. The level of protection achieved to date is either incomplete or ephemeral. Hence, an effic...

    Authors: Ma Ángeles Castillejo, Ana M Maldonado, Eliane Dumas-Gaudot, Mónica Fernández-Aparicio, Rafael Susín, Rubiales Diego and Jesús V Jorrín
    Citation: BMC Genomics 2009 10:294
    Content type: Research article Published on:

  50. Increases during aging in extracellular levels of glutamate (Glu), the major excitatory neurotransmitter in the brain, may be linked to chronic neurodegenerative diseases. Little is known about the molecular r...

    Authors: Xinkun Wang, Xiaodong Bao, Ranu Pal, Abdulbaki Agbas and Elias K Michaelis
    Citation: BMC Genomics 2010 11:360
    Content type: Research article Published on:

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BMC Genomics

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