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6355 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 114 of 128

  1. The study of epigenetic processes and mechanisms present a dynamic approach to assess complex individual variation in obesity susceptibility. However, few studies have examined epigenetic patterns in preschool...

    Authors: Kathryn Tully Oelsner, Yan Guo, Sophie Bao-Chieu To, Amy L. Non and Shari L. Barkin
    Citation: BMC Genomics 2017 18:57
  2. Dickeya zeae is a bacterial species that infects monocotyledons and dicotyledons. Two antibiotic-like phytotoxins named zeamine and zeamine II were reported to play an important role i...

    Authors: Jianuan Zhou, Yingying Cheng, Mingfa Lv, Lisheng Liao, Yufan Chen, Yanfang Gu, Shiyin Liu, Zide Jiang, Yuanyan Xiong and Lianhui Zhang
    Citation: BMC Genomics 2015 16:571
  3. Piper nigrum L., or “black pepper”, is an economically important spice crop in tropical regions. Black pepper production is markedly affected by foot rot disease caused by Phytophthora...

    Authors: Chaoyun Hao, Zhiqiang Xia, Rui Fan, Lehe Tan, Lisong Hu, Baoduo Wu and Huasong Wu
    Citation: BMC Genomics 2016 17:822
  4. Tomato (Solanum lycopersicum), one of the world’s most important vegetable crops, is highly susceptible to necrotrophic fungal pathogens such as Botrytis cinerea and Alternaria solani. Improving resistance throug...

    Authors: Jonathon E Smith, Bemnet Mengesha, Hua Tang, Tesfaye Mengiste and Burton H Bluhm
    Citation: BMC Genomics 2014 15:334
  5. Ticks are obligate haematophagous ectoparasites considered second to mosquitos as vectors and reservoirs of multiple pathogens of global concern. Individual variation in tick infestation has been reported in i...

    Authors: Abulgasim M. Ahbara, Médiha Khamassi Khbou, Rihab Rhomdhane, Limam Sassi, Mohamed Gharbi, Aynalem Haile, Mourad Rekik, Barbara Rischkowsky and Joram M. Mwacharo
    Citation: BMC Genomics 2022 23:167
  6. Plant miRNAs play crucial roles in responses to drought and developmental processes. It is essential to understand the association of miRNAs with drought-tolerance (DT), as well as their impacts on growth, dev...

    Authors: Hui Xia, Shunwu Yu, Deyan Kong, Jie Xiong, Xiaosong Ma, Liang Chen and Lijun Luo
    Citation: BMC Genomics 2020 21:232
  7. Bacillus cereus, Bacillus anthracis and Bacillus thuringiensis belong to the genetically close-knit Bacillus cereus sensu lato group, a family of rod-shaped Gram-positive bacteria. pAW63 is the first conjugative ...

    Authors: Géraldine A Van der Auwera, Lars Andrup and Jacques Mahillon
    Citation: BMC Genomics 2005 6:103
  8. Chromosomal rearrangements in the form of deletions, insertions, inversions and translocations are frequently observed in breast cancer genomes, and a subset of these rearrangements may play a crucial role in ...

    Authors: Xiang Jiao, Sean D Hooper, Tatjana Djureinovic, Chatarina Larsson, Fredrik Wärnberg, Christian Tellgren-Roth, Johan Botling and Tobias Sjöblom
    Citation: BMC Genomics 2013 14:165
  9. Heat stress has a substantial negative economic impact on the dairy industry. N6-methyladenosine (m6A) is the most common internal RNA modification in eukaryotes and plays a key role in regulating heat stress ...

    Authors: Ying Qi, Yiming Zhang, Jing Zhang, Jing Wang and Qiuling Li
    Citation: BMC Genomics 2022 23:829
  10. The bZIP gene family has important roles in various biological processes, including development and stress responses. However, little information about this gene family is available for Wheel Wingnut (Cyclocarya ...

    Authors: Yu-Tian Tao, Lu-Xi Chen, Jie Jin, Zhao-Kui Du and Jun-Min Li
    Citation: BMC Genomics 2022 23:743
  11. The development of microarray resources for the chicken is an important step in being able to profile gene expression changes occurring in birds in response to different challenges and stimuli. The creation of...

    Authors: Jacqueline Smith, David Speed, Paul M Hocking, Richard T Talbot, Winfried GJ Degen, Virgil EJC Schijns, Elizabeth J Glass and David W Burt
    Citation: BMC Genomics 2006 7:49
  12. Protein aggregation and its pathological effects are the major cause of several neurodegenerative diseases. In Huntington’s disease an elongated stretch of polyglutamines within the protein Huntingtin leads to...

    Authors: Katharina Papsdorf, Christoph J. O. Kaiser, Adrian Drazic, Stefan W. Grötzinger, Carmen Haeßner, Wolfgang Eisenreich and Klaus Richter
    Citation: BMC Genomics 2015 16:662
  13. Hungarian white goose has excellent down production performance and was introduced to China in 2010. The growth and development of feather follicles has an important impact on down production. Goose feather fo...

    Authors: Yupu Song, Chang Liu, Yuxuan Zhou, Guangyu Lin, Chenguang Xu, Petunia Msuthwana, Sihui Wang, Jingyun Ma, Fangming Zhuang, Xianou Fu, Yudong Wang, Tuoya Liu, Qianyan Liu, Jingbo Wang, Yujian Sui and Yongfeng Sun
    Citation: BMC Genomics 2022 23:821
  14. The whitefly Trialeurodes vaporariorum is an economically important crop pest in temperate regions that has developed resistance to most classes of insecticides. However, the molecular mechanisms underlying resis...

    Authors: Nikos Karatolos, Yannick Pauchet, Paul Wilkinson, Ritika Chauhan, Ian Denholm, Kevin Gorman, David R Nelson, Chris Bass, Richard H ffrench-Constant and Martin S Williamson
    Citation: BMC Genomics 2011 12:56
  15. Protein functional diversity at the post-transcriptional level is regulated through spliceosome mediated pre-mRNA alternative splicing (AS) events and that has been widely demonstrated to be a key player in re...

    Authors: Xiang Jia Min, Brian Powell, Jonathan Braessler, John Meinken, Feng Yu and Gaurav Sablok
    Citation: BMC Genomics 2015 16:721
  16. In Arabidopsis thaliana (L.) Heynh and Oryza sativa L., a large number of genes encode proteins of unknown functions, whose characterization still remains one of the major challenges. With an aim to characterize ...

    Authors: Hemant R Kushwaha, Anil K Singh, Sudhir K Sopory, Sneh L Singla-Pareek and Ashwani Pareek
    Citation: BMC Genomics 2009 10:200
  17. Enhancers are non-coding DNA fragments which are crucial in gene regulation (e.g. transcription and translation). Having high locational variation and free scattering in 98% of non-encoding genomes, enhancer i...

    Authors: Quang H. Nguyen, Thanh-Hoang Nguyen-Vo, Nguyen Quoc Khanh Le, Trang T.T. Do, Susanto Rahardja and Binh P. Nguyen
    Citation: BMC Genomics 2019 20(Suppl 9):951

    This article is part of a Supplement: Volume 20 Supplement 9

  18. Pseudoautosomal regions (PAR1 and PAR2) in eutherians retain homologous regions between the X and Y chromosomes that play a critical role in the obligatory X-Y crossover during male meiosis. Genes that reside ...

    Authors: Michael A Levy, Andrew D Fernandes, Deanna C Tremblay, Claudia Seah and Nathalie G Bérubé
    Citation: BMC Genomics 2008 9:468
  19. DNA double-stranded breaks (DSBs) are potentially deleterious events in a cell. The end structures (blunt, 3′- and 5′-overhangs) at DSB sites contribute to the fate of their repair and provide critical informa...

    Authors: Karol Szlachta, Heather M. Raimer, Laurey D. Comeau and Yuh-Hwa Wang
    Citation: BMC Genomics 2020 21:25
  20. Glucosidase II beta subunit (GluIIß), encoded from PRKCSH, is a subunit of the glucosidase II enzyme responsible for quality control of N-linked glycoprotein folding and suppression of GluIIß led to inhibitory ef...

    Authors: Worapong Khaodee, Guo Xiyuan, Moe Thi Thi Han, Chatchai Tayapiwatana, Sawitree Chiampanichayakul, Songyot Anuchapreeda and Ratchada Cressey
    Citation: BMC Genomics 2024 25:82
  21. Plant U-box (PUB) E3 ubiquitin ligases have vital effects on various biological processes. Therefore, a comprehensive and systematic identification of the members of the U-box gene family in potato will help t...

    Authors: Zhen Liu, Lei Wang, Yuanming Li, Jinyong Zhu, Zhitao Li, Limin Chen, Hongyang Li, Tianbin Shi, Panfeng Yao, Zhenzhen Bi, Chao Sun, Jiangping Bai, Junlian Zhang and Yuhui Liu
    Citation: BMC Genomics 2024 25:10
  22. Leaf color mutants are the ideal materials to explore the pathways of chlorophyll (Chl) metabolism, chloroplast development, and photosynthesis system. In this study, a spontaneous yellow-green leaf wucai (Brassi...

    Authors: Libing Nie, Yushan Zheng, Liting Zhang, Ying Wu, Shidong Zhu, Jinfeng Hou, Guohu Chen, Xiaoyan Tang, Chenggang Wang and Lingyun Yuan
    Citation: BMC Genomics 2021 22:258
  23. Foxtail millet (Setaria italica) is one of the oldest domesticated crops and has been considered as an ideal model plant for C4 grasses. It has abundant type of anther and hull colors which is not only a most int...

    Authors: Huifang Xie, Junliang Hou, Nan Fu, Menghan Wei, Yunfei Li, Kang Yu, Hui Song, Shiming Li and Jinrong Liu
    Citation: BMC Genomics 2021 22:556
  24. Advances in genomics technologies are making it increasingly feasible to characterize breeding lines that carry traits of agronomic interest. Tobacco germplasm lines that carry loci designated VAM and va have bee...

    Authors: Kurtis L. Dluge, Zhongbang Song, Bingwu Wang, W. Tyler Steede, Bingguang Xiao, Yong Liu and Ralph E. Dewey
    Citation: BMC Genomics 2018 19:484
  25. Sweetpotato whitefly, Bemisia tabaci MED/Q and MEAM1/B, are two economically important invasive species that cause considerable damages to agriculture crops through direct feeding and indirect vectoring of plant ...

    Authors: Wen Xie, Xin Yang, Chunhai Chen, Zezhong Yang, Litao Guo, Dan Wang, Jinqun Huang, Hailin Zhang, Yanan Wen, Jinyang Zhao, Qingjun Wu, Shaoli Wang, Brad S. Coates, Xuguo Zhou and Youjun Zhang
    Citation: BMC Genomics 2018 19:68
  26. Macrosatellite repeats (MSRs), usually spanning hundreds of kilobases of genomic DNA, comprise a significant proportion of the human genome. Because of their highly polymorphic nature, MSRs represent an extrem...

    Authors: Mireille Schaap, Richard JLF Lemmers, Roel Maassen, Patrick J van der Vliet, Lennart F Hoogerheide, Herman K van Dijk, Nalan Baştürk, Peter de Knijff and Silvère M van der Maarel
    Citation: BMC Genomics 2013 14:143
  27. Bats are able to employ an astonishingly complex vocal repertoire for navigating their environment and conveying social information. A handful of species also show evidence for vocal learning, an extremely rar...

    Authors: Pedro Rodenas-Cuadrado, Xiaowei Sylvia Chen, Lutz Wiegrebe, Uwe Firzlaff and Sonja C. Vernes
    Citation: BMC Genomics 2015 16:836
  28. Iron plays a crucial role in the growth of Mycobacterium tuberculosis (M. tuberculosis). However, the precise regulatory mechanism governing this system requires further elucidation. Additionally, limited studies...

    Authors: Yameng Li, Yifan Li, Yao Liu, Xianglong Kong, Ningning Tao, Yawei Hou, Tingting Wang, Qilin Han, Yuzhen Zhang, Fei Long and Huaichen Li
    Citation: BMC Genomics 2024 25:249
  29. Bifidobacteria are among the first anaerobic bacteria colonizing the gut. Bifidobacteria require iron for growth and their iron-sequestration mechanisms are important for their fitness and possibly inhibit ent...

    Authors: Pamela Vazquez-Gutierrez, Marc J. A. Stevens, Peter Gehrig, Simon Barkow-Oesterreicher, Christophe Lacroix and Christophe Chassard
    Citation: BMC Genomics 2017 18:41
  30. Plant miRNAs are a class of small non-coding RNAs that can repress gene expression at the post-transcriptional level by targeting RNA degradation or promoting translational repression. There is increasing evid...

    Authors: Juan M. Crescente, Diego Zavallo, Mariana del Vas, Sebastián Asurmendi, Marcelo Helguera, Elmer Fernandez and Leonardo S. Vanzetti
    Citation: BMC Genomics 2022 23:154
  31. The dramatic increase in myotomal muscle mass in post-hatching fish is related to their ability to lastingly produce new muscle fibres, a process termed hyperplasia. The molecular and cellular mechanisms under...

    Authors: Sabrina Jagot, Nathalie Sabin, Aurélie Le Cam, Jérôme Bugeon, Pierre-Yves Rescan and Jean-Charles Gabillard
    Citation: BMC Genomics 2018 19:865
  32. Proteomic data is a potentially rich, but arguably unexploited, data source for genome annotation. Peptide identifications from tandem mass spectrometry provide prima facie evidence for gene predictions and can d...

    Authors: James C Wright, Deana Sugden, Sue Francis-McIntyre, Isabel Riba-Garcia, Simon J Gaskell, Igor V Grigoriev, Scott E Baker, Robert J Beynon and Simon J Hubbard
    Citation: BMC Genomics 2009 10:61
  33. RNA-seq and small RNA-seq are powerful, quantitative tools to study gene regulation and function. Common high-throughput sequencing methods rely on polymerase chain reaction (PCR) to expand the starting materi...

    Authors: Yu Fu, Pei-Hsuan Wu, Timothy Beane, Phillip D. Zamore and Zhiping Weng
    Citation: BMC Genomics 2018 19:531
  34. Despite the health concerns and nutritional importance of fatty acids, there is a relative paucity of studies in the literature that report genetic or genomic parameters, especially in the case of sheep popula...

    Authors: G. A. Rovadoscki, S. F. N. Pertile, A. B. Alvarenga, A. S. M. Cesar, F. Pértille, J. Petrini, V. Franzo, W. V. B. Soares, G. Morota, M. L. Spangler, L. F. B. Pinto, G. G. P. Carvalho, D. P. D. Lanna, L. L. Coutinho and G. B. Mourão
    Citation: BMC Genomics 2018 19:375
  35. Fish under intensive culture conditions are exposed to a variety of acute and chronic stressors, including high rearing densities, sub-optimal water quality, and severe thermal fluctuations. Such stressors are...

    Authors: Cecilia C Sánchez, Gregory M Weber, Guangtu Gao, Beth M Cleveland, Jianbo Yao and Caird E Rexroad III
    Citation: BMC Genomics 2011 12:626
  36. Colorectal cancer (CRC) is one of the most common malignant tumors worldwide. CRC molecular pathogenesis is heterogeneous and may be followed by mutations in oncogenes and tumor suppressor genes, chromosomal a...

    Authors: Anastasiya Vladimirovna Snezhkina, George Sergeevich Krasnov, Andrew Rostislavovich Zaretsky, Alex Zhavoronkov, Kirill Mikhailovich Nyushko, Alexey Alexandrovich Moskalev, Irina Yurievna Karpova, Anastasiya Isaevna Afremova, Anastasiya Valerievna Lipatova, Dmitriy Vladimitovich Kochetkov, Maria Sergeena Fedorova, Nadezhda Nikolaevna Volchenko, Asiya Fayazovna Sadritdinova, Nataliya Vladimirovna Melnikova, Dmitry Vladimirovich Sidorov, Anatoly Yurievich Popov…
    Citation: BMC Genomics 2016 17(Suppl 14):1011

    This article is part of a Supplement: Volume 17 Supplement 14

  37. Prostate cancer is the most frequently diagnosed cancer in American men, and few effective treatment options are available to patients who develop hormone-refractory prostate cancer. The molecular changes that...

    Authors: Steven N Quayle, Heidi Hare, Allen D Delaney, Martin Hirst, Dorothy Hwang, Jacqueline E Schein, Steven JM Jones, Marco A Marra and Marianne D Sadar
    Citation: BMC Genomics 2007 8:32
  38. Presently, multiple options exist for conducting gene expression profiling studies in swine. In order to determine the performance of some of the existing microarrays, Affymetrix Porcine, Affymetrix Human U133...

    Authors: Shengdar Tsai, Bashir Mir, Amy C Martin, Jose L Estrada, Steve R Bischoff, Wen-ping Hsieh, Joseph P Cassady, Bradley A Freking, Dan J Nonneman, Gary A Rohrer and Jorge A Piedrahita
    Citation: BMC Genomics 2006 7:328
  39. Mature saturated brine (crystallizers) communities are largely dominated (>80% of cells) by the square halophilic archaeon "Haloquadratum walsbyi". The recent cultivation of the strain HBSQ001 and thesequencing o...

    Authors: Boris A Legault, Arantxa Lopez-Lopez, Jose Carlos Alba-Casado, W Ford Doolittle, Henk Bolhuis, Francisco Rodriguez-Valera and R Thane Papke
    Citation: BMC Genomics 2006 7:171
  40. Adaptations to a new environment, such as a polluted one, often involve large modifications of the existing phenotypes. Changes in gene expression and regulation during critical developmental stages may explai...

    Authors: Goran Bozinovic, Tim L Sit, Richard Di Giulio, Lauren F Wills and Marjorie F Oleksiak
    Citation: BMC Genomics 2013 14:779
  41. Large-scale identification of the interrelationships between different components of the cell, such as the interactions between proteins, has recently gained great interest. However, unraveling large-scale pro...

    Authors: Stefanie De Bodt, Sebastian Proost, Klaas Vandepoele, Pierre Rouzé and Yves Van de Peer
    Citation: BMC Genomics 2009 10:288
  42. Aldehyde dehydrogenases (ALDHs) represent a group of enzymes that detoxify aldehydes by facilitating their oxidation to carboxylic acids, and have been shown to play roles in plant response to abiotic stresses...

    Authors: Wei Wang, Wei Jiang, Juge Liu, Yang Li, Junyi Gai and Yan Li
    Citation: BMC Genomics 2017 18:518
  43. Hundreds of millions of people are infected with cryptosporidiosis annually, with immunocompromised individuals suffering debilitating symptoms and children in socioeconomically challenged regions at risk of r...

    Authors: Jennifer D Artz, Amy K Wernimont, Abdellah Allali-Hassani, Yong Zhao, Mehrnaz Amani, Yu-Hui Lin, Guillermo Senisterra, Gregory A Wasney, Oleg Fedorov, Oliver King, Annette Roos, Vlad V Lunin, Wei Qiu, Patrick Finerty Jr, Ashley Hutchinson, Irene Chau…
    Citation: BMC Genomics 2011 12:478
  44. Bacterial respiratory tract infections, mainly caused by Streptococcus pneumoniae, Haemophilus influenzae and Moraxella catarrhalis are among the leading causes of global mortality and morbidity. Increased resist...

    Authors: Fredrick M Mobegi, Sacha AFT van Hijum, Peter Burghout, Hester J Bootsma, Stefan PW de Vries, Christa E van der Gaast-de Jongh, Elles Simonetti, Jeroen D Langereis, Peter WM Hermans, Marien I de Jonge and Aldert Zomer
    Citation: BMC Genomics 2014 15:958
  45. Cyanobacteria are of special concern because they proliferate in eutrophic water bodies worldwide and affect water quality. As an ancient photosynthetic microorganism, cyanobacteria can survive in ecologically...

    Authors: Meng Chen, Chun-Yang Xu, Xu Wang, Chong-Yang Ren, Jiao Ding and Li Li
    Citation: BMC Genomics 2020 21:217

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