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  2. Insecticide-treated bed nets and indoor residual spraying comprise the major control measures against Anopheles gambiae sl, the dominant vector in sub-Saharan Africa. The primary site of contact with insecticide ...

    Authors: M. Kefi, J. Charamis, V. Balabanidou, P. Ioannidis, H. Ranson, V. A. Ingham and J. Vontas
    Citation: BMC Genomics 2021 22:891
    Content type: Research Published on:

  3. Avian necrotic enteritis (NE) caused by Clostridium perfringens is a disease with a major economic impact, generating losses estimated to 6 billion of dollars annually for the poultry industry worldwide. The inci...

    Authors: Ilhem Meniaï, Alexandre Thibodeau, Sylvain Quessy, Valeria R. Parreira, Philippe Fravalo, Guy Beauchamp and Marie-Lou Gaucher
    Citation: BMC Genomics 2021 22:890
    Content type: Research Published on:

  6. Pyramiding different resistance genes into one plant genotype confers enhanced resistance at the phenotypic level, but the molecular mechanisms underlying this effect are not well-understood. In soybean, aphid...

    Authors: Martha I. Natukunda, Jessica D. Hohenstein, Chantal E. McCabe, Michelle A. Graham, Yunhui Qi, Asheesh K. Singh and Gustavo C. MacIntosh
    Citation: BMC Genomics 2021 22:887
    Content type: Research article Published on:

  7. Recently, ProFAT and BATLAS studies identified brown and white adipocytes marker genes based on analysis of large databases. They offered scores to determine the thermogenic status of adipocytes using the gene...

    Authors: Beáta B. Tóth, Zoltán Barta, Ákos Barnabás Barta and László Fésüs
    Citation: BMC Genomics 2021 22:886
    Content type: Database Published on:

  8. Rose is one of the most popular flowers in the wold. Its field growth and quality are negatively affected by aphids. However, the defence mechanisms used by rose plants against aphids are unclear. Therefore, t...

    Authors: Penghua Gao, Hao Zhang, Huijun Yan, Ningning Zhou, Bo Yan, Yuanlan Fan, Kaixue Tang and Xianqin Qiu
    Citation: BMC Genomics 2021 22:885
    Content type: Research Published on:

  9. Bovine viral diarrhea virus (BVDV) is a major pathogen that causes bovine viral diarrhea/mucosal disease (BVD-MD), which has become a global infectious disease due to its wide spread and the lack of effective ...

    Authors: Yanping Li, Tingli Liu, Guoliang Chen, Liqun Wang, Aimin Guo, Zhi Li, Li Pan, Li Mao and Xuenong Luo
    Citation: BMC Genomics 2021 22:884
    Content type: Research Published on:

  10. BBX transcription factors are a kind of zinc finger transcription factors with one or two B-box domains, which partilant in plant growth, development and response to abiotic or biotic stress. The BBX family ha...

    Authors: Jing Ma, Jia-xi Dai, Xiao-wei Liu and Duo Lin
    Citation: BMC Genomics 2021 22:883
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2023 24:785

  11. The node of the first fruiting branch (NFFB) is an important precocious trait in cotton. Many studies have been conducted on the localization of quantitative trait loci (QTLs) and genes related to fiber qualit...

    Authors: Jingjing Zhang, Xiaoyun Jia, Xiaohao Guo, Hengling Wei, Meng Zhang, Aimin Wu, Shuaishuai Cheng, Xiaoqian Cheng, Shuxun Yu and Hantao Wang
    Citation: BMC Genomics 2021 22:882
    Content type: Research Published on:

  12. Acute or chronic irreversible respiratory failure may occur in patients undergoing pneumonectomy. Aim of this study was to determine transcriptome expression changes after experimental pneumonectomy in swine m...

    Authors: Valerio Napolioni, Fortunato Bianconi, Rossella Potenza, Francesco M. Carpi, Vienna Ludovini, Matteo Picciolini, Francesca R. Tofanetti, Antonello Bufalari, Stefano Pallotti, Camilla Poggi, Marco Anile, Niccolò Daddi, Federico Venuta, Francesco Puma and Jacopo Vannucci
    Citation: BMC Genomics 2021 22:881
    Content type: Research Published on:

  13. The Stephania tetrandra S. Moore (S. tetrandra) is a medicinal plant belonging to the family Menispermaceae that has high medicinal value and is well worth doing further exploration. The wild resources of S. tetr...

    Authors: Shujie Dong, Zhiqi Ying, Shuisheng Yu, Qirui Wang, Guanghui Liao, Yuqing Ge and Rubin Cheng
    Citation: BMC Genomics 2021 22:880
    Content type: Research Published on:

  15. Coilia nasus is an important anadromous fish, widely distributed in China, Japan, and Korea. Based on morphological and ecological researches of C. nasus, two ecotypes were identified. One is the anadromous popul...

    Authors: Jun Gao, Gangchun Xu and Pao Xu
    Citation: BMC Genomics 2021 22:878
    Content type: Research Published on:

  16. With the emphasis on analysing genotype-by-environment interactions within the framework of genomic selection and genome-wide association analysis, there is an increasing demand for reliable tools that can be ...

    Authors: Xiujin Li, Hailiang Song, Zhe Zhang, Yunmao Huang, Qin Zhang and Xiangdong Ding
    Citation: BMC Genomics 2021 22:877
    Content type: Software Published on:

  17. The nuclear transport machinery is involved in a well-known male meiotic drive system in Drosophila. Fast gene evolution and gene duplications have been major underlying mechanisms in the evolution of meiotic dri...

    Authors: Ayda Mirsalehi, Dragomira N. Markova, Mohammadmehdi Eslamieh and Esther Betrán
    Citation: BMC Genomics 2021 22:876
    Content type: Research Published on:

  18. Natural variation in protein expression is common in all organisms and contributes to phenotypic differences among individuals. While variation in gene expression at the transcript level has been extensively i...

    Authors: Alyssa Erickson, Suiping Zhou, Jie Luo, Ling Li, Xin Huang, Zachary Even, He Huang, Hai-Ming Xu, Junmin Peng, Lu Lu and Xusheng Wang
    Citation: BMC Genomics 2021 22:875
    Content type: Research article Published on:

  19. The black rockfish (Sebastes schlegelii) has an ovoviviparous reproductive pattern and long-term sperm storage, resulting in asynchronous gonadal development between the sexes. However, the comprehensive understa...

    Authors: Jianshuang Li, Likang Lyu, Haishen Wen, Yun Li, Xiaojie Wang, Ying Zhang, Yijia Yao and Xin Qi
    Citation: BMC Genomics 2021 22:874
    Content type: Research article Published on:

  21. Pediatric cancers typically have a distinct genomic landscape when compared to adult cancers and frequently carry somatic gene fusion events that alter gene expression and drive tumorigenesis. Sensitive and sp...

    Authors: Stephanie LaHaye, James R. Fitch, Kyle J. Voytovich, Adam C. Herman, Benjamin J. Kelly, Grant E. Lammi, Jeremy A. Arbesfeld, Saranga Wijeratne, Samuel J. Franklin, Kathleen M. Schieffer, Natalie Bir, Sean D. McGrath, Anthony R. Miller, Amy Wetzel, Katherine E. Miller, Tracy A. Bedrosian…
    Citation: BMC Genomics 2021 22:872
    Content type: Methodology article Published on:

  22. In insect societies, queens monopolize reproduction while workers perform tasks such as brood care or foraging. Queen loss leads to ovary development and lifespan extension in workers of many ant species. Howe...

    Authors: Marina Choppin, Barbara Feldmeyer and Susanne Foitzik
    Citation: BMC Genomics 2021 22:871
    Content type: Research Published on:

  23. Dietary high fructose (HFr) is a known metabolic disruptor contributing to development of obesity and diabetes in Western societies. Initial molecular changes from exposure to HFr on liver metabolism may be es...

    Authors: Laura A. Cox, Jeannie Chan, Prahlad Rao, Zeeshan Hamid, Jeremy P. Glenn, Avinash Jadhav, Vivek Das, Genesio M. Karere, Ellen Quillen, Kylie Kavanagh and Michael Olivier
    Citation: BMC Genomics 2021 22:870
    Content type: Research Published on:

  24. Endothelial cell senescence is the state of permanent cell cycle arrest and plays a critical role in the pathogenesis of age-related diseases. However, a comprehensive understanding of the gene regulatory netw...

    Authors: Momoko Ohori, Yusuke Nakayama, Mari Ogasawara-Shimizu, Hiroyoshi Toyoshiba, Atsushi Nakanishi, Samuel Aparicio and Shinsuke Araki
    Citation: BMC Genomics 2021 22:869
    Content type: Research Published on:

  25. As a popular and valuable technique, grafting is widely used to protect against soil-borne diseases and nematodes in vegetable production. Growing evidences have revealed that long intergenic ncRNAs (lincRNAs)...

    Authors: Junliang Yin, Jiahui Yan, Lu Hou, Liling Jiang, Wenrong Xian and Qingyun Guo
    Citation: BMC Genomics 2021 22:868
    Content type: Research Published on:

  26. Xylan is one of the most abundant hemicelluloses and can crosslink cellulose and lignin to increase the stability of cell walls. A number of genes encoding glycosyltransferases play vital roles in xylan biosyn...

    Authors: Zhen Li, Xinyue Wang, Kebin Yang, Chenglei Zhu, Tingting Yuan, Jiongliang Wang, Ying Li and Zhimin Gao
    Citation: BMC Genomics 2021 22:867
    Content type: Research Published on:

  27. In physoclist fishes filling of the swimbladder requires acid secretion of gas gland cells to switch on the Root effect and subsequent countercurrent concentration of the initial gas partial pressure increase ...

    Authors: Gabriel Schneebauer, Victoria Drechsel, Ron Dirks, Klaus Faserl, Bettina Sarg and Bernd Pelster
    Citation: BMC Genomics 2021 22:866
    Content type: Research Published on:

  28. Ramie is an important fiber-producing crop in China, and its fibers are widely used as textile materials. Fibers contain specialized secondary cellular walls that are mainly composed of cellulose, hemicellulos...

    Authors: Fu Li, Zheng Zeng, Renyan Huang, Yanzhou Wang and Touming Liu
    Citation: BMC Genomics 2021 22:865
    Content type: Research Published on:

  29. Prolamins, unique to Gramineae (grasses), play a key role in the human diet. Thinopyrum elongatum (syn. Agropyron elongatum or Lophopyrum elongatum), a grass of the Triticeae family with a diploid E genome (2n = ...

    Authors: Wenyang Ge, Yu Gao, Shoushen Xu, Xin Ma, Hongwei Wang, Lingrang Kong and Silong Sun
    Citation: BMC Genomics 2021 22:864
    Content type: Research Published on:

  30. Recently, erdafitinib (Balversa), the first targeted therapy drug for genetic alteration, was approved to metastatic urothelial carcinoma. Cancer genomics research has been greatly encouraged. Currently, a lar...

    Authors: Yongqing Zhang, Qingyuan Chen, Meiqin Gong, Yuanqi Zeng and Dongrui Gao
    Citation: BMC Genomics 2021 22(Suppl 1):863
    Content type: Research Published on:

    This article is part of a Supplement: Volume 22 Supplement 1

  32. To explore the long non-coding RNA (lncRNA) expression pattern of congenital lung malformations on a genome-wide scale and investigate their potential biological function in four subtypes of congenital lung ma...

    Authors: Weili Yang, Pu Zhao, Yun Liu, Ping Cao, Xiang Ji, Ya Gao, Peng Li and Jiwen Cheng
    Citation: BMC Genomics 2021 22:861
    Content type: Research Published on:

  36. As a powerful tool, RNA-Seq has been widely used in various studies. Usually, unmapped RNA-seq reads have been considered as useless and been trashed or ignored.

    Authors: Dongwei Li, Qitong Huang, Lei Huang, Jikai Wen, Jing Luo, Qing Li, Yanling Peng and Yubo Zhang
    Citation: BMC Genomics 2021 22:857
    Content type: Methodology article Published on:

  37. High-producing Holstein Friesian dairy cattle have a characteristic black and white coat, often with large proportions of black. Compared to a light coat color, black absorbs more solar radiation which is a co...

    Authors: G. Laible, S.-A. Cole, B. Brophy, J. Wei, S. Leath, S. Jivanji, M. D. Littlejohn and D. N. Wells
    Citation: BMC Genomics 2021 22:856
    Content type: Research Published on:

  38. Microexons are a particular kind of exon of less than 30 nucleotides in length. More than 60% of annotated human microexons were found to have high levels of sequence conservation, suggesting their potential f...

    Authors: Qi Cheng, Bo He, Chengkui Zhao, Hongyuan Bi, Duojiao Chen, Shuangze Han, Haikuan Gao and Weixing Feng
    Citation: BMC Genomics 2021 22:855
    Content type: Research Published on:

  39. Despite proven therapeutic effects in inflammatory conditions, the specific mechanisms of phytochemical therapies are not well understood. The transcriptome effects of Traumeel (Tr14), a multicomponent natural...

    Authors: Georges St. Laurent III, Ian Toma, Bernd Seilheimer, Konstantin Cesnulevicius, Myron Schultz, Michael Tackett, Jianhua Zhou, Maxim Ri, Dmitry Shtokalo, Denis Antonets, Tisha Jepson and Timothy A. McCaffrey
    Citation: BMC Genomics 2021 22:854
    Content type: Research Published on:

  41. Idiopathic membranous nephropathy (IMN) is a cause of nephrotic syndrome that is increasing in incidence but has unclear pathogenesis. Urinary peptidomics is a promising technology for elucidating molecular me...

    Authors: Baoxu Lin, Jianhua Liu, Yue Zhang, Yabin Wu, Shixiao Chen, Yibo Bai, Qiuying Liu and Xiaosong Qin
    Citation: BMC Genomics 2021 22:852
    Content type: Research Published on:

  42. As the critical tissue of the central nervous system, the brain has been found to be involved in gonad development. Previous studies have suggested that gonadal fate may be affected by the brain. Identifying b...

    Authors: Xufang Shen, Hongwei Yan, Jieming Jiang, Weiyuan Li, Yuyu Xiong, Qi Liu and Ying Liu
    Citation: BMC Genomics 2021 22:851
    Content type: Research Published on:

  43. The detection and identification of single nucleotide polymorphism (SNP) is essential for determining patient disease susceptibility and the delivery of medicines targeted to the individual. At present, SNP ge...

    Authors: Baowei Li, Yanran Liu, Xiaodan Hao, Jinhua Dong, Limei Chen, Haimei Li, Wei Wu, Ying Liu, Jianxun Wang, Yin Wang and Peifeng Li
    Citation: BMC Genomics 2021 22:850
    Content type: Methodology article Published on:

  44. Genome assembly of viruses with high mutation rates, such as Norovirus and other RNA viruses, or from metagenome samples, poses a challenge for the scientific community due to the coexistence of several viral ...

    Authors: Azahara Fuentes-Trillo, Carolina Monzó, Iris Manzano, Cristina Santiso-Bellón, Juliana da Silva Ribeiro de Andrade, Roberto Gozalbo-Rovira, Ana-Bárbara García-García, Jesús Rodríguez-Díaz and Felipe Javier Chaves
    Citation: BMC Genomics 2021 22:849
    Content type: Methodology article Published on:

  45. The genus Xanthomonas has long been considered to consist predominantly of plant pathogens, but over the last decade there has been an increasing number of reports on non-pathogenic and endophytic members. As Xan...

    Authors: Dennie te Molder, Wasin Poncheewin, Peter J. Schaap and Jasper J. Koehorst
    Citation: BMC Genomics 2021 22:848
    Content type: Research Published on:

  46. Fundamental knowledge of cellular and molecular mechanisms in developing testicular tissues is critical to better understand gonadal biology and responses to non-physiological conditions. The objective of our ...

    Authors: Olga Amelkina, Andreia M. da Silva, Alexandre R. Silva and Pierre Comizzoli
    Citation: BMC Genomics 2021 22:847
    Content type: Research Published on:

  48. Covalent modifications of core histones govern downstream DNA-templated processes such as transcription by altering chromatin structure and function. Previously, we reported that the plant homeodomain protein ...

    Authors: Isabel Cristina Vélez-Bermúdez and Wolfgang Schmidt
    Citation: BMC Genomics 2021 22:845
    Content type: Research Published on:

  49. Tuberculosis is one of the deadliest disease caused by Mycobacterium tuberculosis. Its treatment still becomes a burden for many countries including Indonesia. Drug resistance is one of the problems in TB treatme...

    Authors: Yustinus Maladan, Hana Krismawati, Tri Wahyuni, Ratna Tanjung, Kamla Awaludin, Kholis Abdurachim Audah and Arli Aditya Parikesit
    Citation: BMC Genomics 2021 22:844
    Content type: Research Published on:

  50. Scab is the most important fungal disease of apple and pear. Apple (Malus x domestica Borkh.) and European pear (Pyrus communis L.) are genetically related but they are hosts of two different fungal species: Vent...

    Authors: L. Perchepied, E. Chevreau, E. Ravon, S. Gaillard, S. Pelletier, M. Bahut, P. Berthelot, R. Cournol, H. J. Schouten and E. Vergne
    Citation: BMC Genomics 2021 22:843
    Content type: Research Published on:

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BMC Genomics

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