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  1. The large amounts of data generated by genomics, transcriptomics and proteomics have increased our understanding of the biology of Anaplasma marginale. However, these data have also led to new assumptions that re...

    Authors: Francy L Crosby, Heather L Wamsley, Melanie G Pate, Anna M Lundgren, Susan M Noh, Ulrike G Munderloh and Anthony F Barbet
    Citation: BMC Genomics 2014 15:278
  2. Monitoring alien introgressions in crop plants is difficult due to the lack of genetic and molecular mapping information on the wild crop relatives. The tertiary gene pool of wheat is a very important source o...

    Authors: Vijay K Tiwari, Shichen Wang, Sunish Sehgal, Jan Vrána, Bernd Friebe, Marie Kubaláková, Praveen Chhuneja, Jaroslav Doležel, Eduard Akhunov, Bhanu Kalia, Jamal Sabir and Bikram S Gill
    Citation: BMC Genomics 2014 15:273
  3. Within the genus Streptococcus, only Streptococcus thermophilus is used as a starter culture in food fermentations. Streptococcus macedonicus though, which belongs to the Streptococcus bovis/Streptococcus equinus

    Authors: Konstantinos Papadimitriou, Rania Anastasiou, Eleni Mavrogonatou, Jochen Blom, Nikos C Papandreou, Stavros J Hamodrakas, Stéphanie Ferreira, Pierre Renault, Philip Supply, Bruno Pot and Effie Tsakalidou
    Citation: BMC Genomics 2014 15:272
  4. Soybean (Glycine max L.) is one of the world’s most important leguminous crops producing high-quality protein and oil. Increasing the relative oil concentration in soybean seeds is many researchers’ goal, but a c...

    Authors: Juan Yu, Zhenhai Zhang, Jiangang Wei, Yi Ling, Wenying Xu and Zhen Su
    Citation: BMC Genomics 2014 15:271
  5. Leprosy has afflicted humankind throughout history leaving evidence in both early texts and the archaeological record. In Britain, leprosy was widespread throughout the Middle Ages until its gradual and unexpl...

    Authors: Tom A Mendum, Verena J Schuenemann, Simon Roffey, G Michael Taylor, Huihai Wu, Pushpendra Singh, Katie Tucker, Jason Hinds, Stewart T Cole, Andrzej M Kierzek, Kay Nieselt, Johannes Krause and Graham R Stewart
    Citation: BMC Genomics 2014 15:270
  6. Recently it has been shown that Ensifer adhaerens can be used as a plant transformation technology, transferring genes into several plant genomes when equipped with a Ti plasmid. For this study, we have sequenced...

    Authors: Steven Rudder, Fiona Doohan, Christopher J Creevey, Toni Wendt and Ewen Mullins
    Citation: BMC Genomics 2014 15:268
  7. The Manila clam (Ruditapes philippinarum) is a cultured bivalve with worldwide commercial importance, and diseases cause high economic losses. For this reason, interest in the immune genes in this species has rec...

    Authors: Rebeca Moreira, Massimo Milan, Pablo Balseiro, Alejandro Romero, Massimiliano Babbucci, Antonio Figueras, Luca Bargelloni and Beatriz Novoa
    Citation: BMC Genomics 2014 15:267
  8. Starvation not only affects the nutritional and health status of the animals, but also the microbial composition in the host’s intestine. Next-generation sequencing provides a unique opportunity to explore gut...

    Authors: Jun Hong Xia, Grace Lin, Gui Hong Fu, Zi Yi Wan, May Lee, Le Wang, Xiao Jun Liu and Gen Hua Yue
    Citation: BMC Genomics 2014 15:266
  9. The data released by the 1000 Genomes Project contain an increasing number of genome sequences from different nations and populations with a large number of genetic variations. As a result, the focus of human ...

    Authors: Yunchao Ling, Zhong Jin, Mingming Su, Jun Zhong, Yongbing Zhao, Jun Yu, Jiayan Wu and Jingfa Xiao
    Citation: BMC Genomics 2014 15:265
  10. The rapid evolution in high-throughput sequencing (HTS) technologies has opened up new perspectives in several research fields and led to the production of large volumes of sequence data. A fundamental step in...

    Authors: Ségolène Caboche, Christophe Audebert, Yves Lemoine and David Hot
    Citation: BMC Genomics 2014 15:264
  11. Copper is essential for the survival of aerobic organisms. If copper is not properly regulated in the body however, it can be extremely cytotoxic and genetic mutations that compromise copper homeostasis result...

    Authors: Ulrich Schlecht, Sundari Suresh, Weihong Xu, Ana Maria Aparicio, Angela Chu, Michael J Proctor, Ronald W Davis, Curt Scharfe and Robert P St Onge
    Citation: BMC Genomics 2014 15:263
  12. Targeted capture of genomic regions reduces sequencing cost while generating higher coverage by allowing biomedical researchers to focus on specific loci of interest, such as exons. Targeted capture also has t...

    Authors: Jeffrey M Kidd, Thomas J Sharpton, Dean Bobo, Paul J Norman, Alicia R Martin, Meredith L Carpenter, Martin Sikora, Christopher R Gignoux, Neda Nemat-Gorgani, Alexandra Adams, Moraima Guadalupe, Xiaosen Guo, Qiang Feng, Yingrui Li, Xiao Liu, Peter Parham…
    Citation: BMC Genomics 2014 15:262
  13. Apple tree breeding is slow and difficult due to long generation times, self-incompatibility, and complex genetics. The identification of molecular markers linked to traits of interest is a way to expedite the...

    Authors: Philip J Jensen, Gennaro Fazio, Naomi Altman, Craig Praul and Timothy W McNellis
    Citation: BMC Genomics 2014 15:261
  14. Enzymes of the cellulose synthase (CesA) family and CesA-like (Csl) families are responsible for the synthesis of celluloses and hemicelluloses, and thus are of great interest to bioenergy research. We studied...

    Authors: Yanbin Yin, Mitrick A Johns, Huansheng Cao and Manju Rupani
    Citation: BMC Genomics 2014 15:260
  15. Equine recurrent laryngeal neuropathy (RLN) is a bilateral mononeuropathy with an unknown pathogenesis that significantly affects performance in Thoroughbreds. A genetic contribution to the pathogenesis of RLN...

    Authors: Adam R Boyko, Samantha A Brooks, Ashley Behan-Braman, Marta Castelhano, Elizabeth Corey, Kyle C Oliveira, June E Swinburne, Rory J Todhunter, Zhiwu Zhang, Dorothy M Ainsworth and Norman Edward Robinson
    Citation: BMC Genomics 2014 15:259
  16. The Polima (pol) system of cytoplasmic male sterility (CMS) and its fertility restoration gene Rfp have been used in hybrid breeding in Brassica napus, which has greatly improved the yield of rapeseed. However, t...

    Authors: Hong An, Zonghui Yang, Bin Yi, Jing Wen, Jinxiong Shen, Jinxing Tu, Chaozhi Ma and Tingdong Fu
    Citation: BMC Genomics 2014 15:258
  17. Although our microbial community and genomes (the human microbiome) outnumber our genome by several orders of magnitude, to what extent the human host genetic complement informs the microbiota composition is n...

    Authors: Jun Ma, Cristian Coarfa, Xiang Qin, Penelope E Bonnen, Aleksandar Milosavljevic, James Versalovic and Kjersti Aagaard
    Citation: BMC Genomics 2014 15:257
  18. Identifying the genotypes underlying human disease phenotypes is a fundamental step in human genetics and medicine. High-throughput genomic technologies provide thousands of genetic variants per individual. Th...

    Authors: Yuval Itan, Mark Mazel, Benjamin Mazel, Avinash Abhyankar, Patrick Nitschke, Lluis Quintana-Murci, Stephanie Boisson-Dupuis, Bertrand Boisson, Laurent Abel, Shen-Ying Zhang and Jean-Laurent Casanova
    Citation: BMC Genomics 2014 15:256
  19. Authors: Ishaq Khan, Mohammed Bangash, Saleh S Baeesa, Awatif Jamal, Hanadi Qashqari, Adel Abuzenadah, Mohammed H. AlQahtani, Ghazi Damanhouri, Hans-Juergen Schulten, Deema Hussein and Adeel Chaudhary
    Citation: BMC Genomics 2014 15(Suppl 2):P53

    This article is part of a Supplement: Volume 15 Supplement 2

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