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6358 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 74 of 128

  1. Despite the convergence of rapid technological advances in genomics and the maturing field of ecoimmunology, our understanding of the genes that regulate immunity in wild populations is still nascent. Previous...

    Authors: Cassandra S. Scalf, Julia H. Chariker, Eric C. Rouchka and Noah T. Ashley
    Citation: BMC Genomics 2019 20:647
    Content type: Research article Published on:

  2. In light of the changes in precipitation and soil water availability expected with climate change, understanding the mechanisms underlying plant responses to water deficit is essential. Toward that end we have...

    Authors: Eli Meyer, Michael J Aspinwall, David B Lowry, Juan Diego Palacio-Mejía, Tierney L Logan, Philip A Fay and Thomas E Juenger
    Citation: BMC Genomics 2014 15:527
    Content type: Research article Published on:

  3. Genome variability generates phenotypic heterogeneity and is of relevance for adaptation to environmental change, but the extent of such variability in natural populations is still poorly understood. For examp...

    Authors: Laura Carreto, Maria F Eiriz, Ana C Gomes, Patrícia M Pereira, Dorit Schuller and Manuel AS Santos
    Citation: BMC Genomics 2008 9:524
    Content type: Research article Published on:

  4. The trypanosomatids Leishmania major, Trypanosoma brucei and Trypanosoma cruzi cause some of the most debilitating diseases of humankind: cutaneous leishmaniasis, African sleeping sickness, and Chagas disease. Th...

    Authors: Marilyn Parsons, Elizabeth A Worthey, Pauline N Ward and Jeremy C Mottram
    Citation: BMC Genomics 2005 6:127
    Content type: Research article Published on:

  5. The PIWI/piRNA pathway is a conserved machinery important for germ cell development and fertility. This piRNA-guided molecular machinery is best known for repressing derepressed transposable elements (TE) duri...

    Authors: Kai-Wei Chang, Yen-Tzu Tseng, Yi-Chen Chen, Chih-Yun Yu, Hung-Fu Liao, Yi-Chun Chen, Yu-Fan Evan Tu, Shinn-Chih Wu, I-Hsuan Liu, Marina Pinskaya, Antonin Morillon, Bertrand Pain and Shau-Ping Lin
    Citation: BMC Genomics 2018 19:425
    Content type: Research article Published on:

    The Correction to this article has been published in BMC Genomics 2018 19:480

  6. Developing drought-tolerant rice varieties with higher yield under water stressed conditions provides a viable solution to serious yield-reduction impact of drought. Understanding the molecular regulation of t...

    Authors: Boon Huat Cheah, Kalaivani Nadarajah, Mayur Dashrath Divate and Ratnam Wickneswari
    Citation: BMC Genomics 2015 16:692
    Content type: Research article Published on:

  7. Efficient mechanisms for rejoining of DNA double-strand breaks (DSBs) are vital because misrepair of such lesions leads to mutation, aneuploidy and loss of cell viability. DSB repair is mediated by proteins ac...

    Authors: Jennifer Summers McKinney, Sunaina Sethi, Jennifer DeMars Tripp, Thuy N Nguyen, Brian A Sanderson, James W Westmoreland, Michael A Resnick and L Kevin Lewis
    Citation: BMC Genomics 2013 14:251
    Content type: Research article Published on:

  8. During domestication, remarkable changes in behavior, morphology, physiology and production performance have taken place in farm animals. As one of the most economically important poultry, goose owns a unique ...

    Authors: Yan Deng, Shenqiang Hu, Chenglong Luo, Qingyuan Ouyang, Li Li, Jiaming Ma, Zhenping Lin, Junpeng Chen, Hehe Liu, Jiwei Hu, Guohong Chen, Dingming Shu, Yuxuan Pan, Bo Hu, Hua He, Hao Qu…
    Citation: BMC Genomics 2021 22:487
    Content type: Research Published on:

  9. Copepods are highly diverse and abundant, resulting in extensive ecological radiation in marine ecosystems. Calanus sinicus dominates continental shelf waters in the northwest Pacific Ocean and plays an important...

    Authors: Wang Minxiao, Sun Song, Li Chaolun and Shen Xin
    Citation: BMC Genomics 2011 12:73
    Content type: Research article Published on:

  11. The genome of Campylobacter jejuni contains two iron activated Fur-family transcriptional regulators, CjFur and CjPerR, which are primarily responsible for regulating iron homeostasis and oxidative stress respect...

    Authors: James Butcher, Rebecca A. Handley, Arnoud H. M. van Vliet and Alain Stintzi
    Citation: BMC Genomics 2015 16:498
    Content type: Research article Published on:

  12. Genomic analysis will greatly benefit from considering in a global way various sources of molecular data with the related biological knowledge. It is thus of great importance to provide useful integrative appr...

    Authors: Marie de Tayrac, Sébastien Lê, Marc Aubry, Jean Mosser and François Husson
    Citation: BMC Genomics 2009 10:32
    Content type: Methodology article Published on:

  13. Citrus bacterial canker is a disease that has severe economic impact on citrus industries worldwide and is caused by a few species and pathotypes of Xanthomonas. X. citri subsp. citri strain 306 (XccA306) is a ty...

    Authors: Neha Jalan, Dibyendu Kumar, Maxuel O Andrade, Fahong Yu, Jeffrey B Jones, James H Graham, Frank F White, João C Setubal and Nian Wang
    Citation: BMC Genomics 2013 14:551
    Content type: Research article Published on:

  14. CCHCR1 (Coiled-Coil α-Helical Rod protein 1) is a putative psoriasis candidate gene with the risk alleles CCHCR1*WWCC and *Iso3, the latter inhibiting the translation of isoform 1. CCHCR1 was recently shown to be...

    Authors: Mari H. Tervaniemi, Shintaro Katayama, Tiina Skoog, H. Annika Siitonen, Jyrki Vuola, Kristo Nuutila, Kristiina Tammimies, Sari Suomela, Esko Kankuri, Juha Kere and Outi Elomaa
    Citation: BMC Genomics 2018 19:432
    Content type: Research article Published on:

  15. Small RNA (sRNA) has been described as a regulator of gene expression. In order to understand the role of maize sRNA (Zea mays – hybrid UENF 506-8) during association with endophytic nitrogen-fixing bacteria, we ...

    Authors: Flávia Thiebaut, Cristian A Rojas, Clícia Grativol, Mariana Romeiro Motta, Tauan Vieira, Michael Regulski, Robert A Martienssen, Laurent Farinelli, Adriana S Hemerly and Paulo CG Ferreira
    Citation: BMC Genomics 2014 15:766
    Content type: Research article Published on:

  16. Modern fast-growing broilers are susceptible to heart failure under heat stress because their relatively small hearts cannot meet increased need of blood pumping. To improve the cardiac tolerance to heat stres...

    Authors: Jibin Zhang, Carl J Schmidt and Susan J Lamont
    Citation: BMC Genomics 2017 18:295
    Content type: Research Article Published on:

  17. The rapid growth of annual shoots is detrimental to peach production. While gibberellin (GA) promotes the rapid growth of peach shoots, there is limited information on the identity and expression profiles of G...

    Authors: Mengmeng Zhang, Yangtao Ma, Xianbo Zheng, Bin Tan, Xia Ye, Wei Wang, Langlang Zhang, Jidong Li, Zhiqian Li, Jun Cheng and Jiancan Feng
    Citation: BMC Genomics 2022 23:730
    Content type: Research Published on:

  18. miRNA is one of the crucial roles in the complex and dynamic network that regulates the development of skeletal muscle. The landscape of skeletal muscle miRNAs from fetus to adult in New Zealand rabbits has no...

    Authors: Jing Jing, Xichun Jiang, Cuiyun Zhu, Qi Zheng, Qianyun Ji, Huiqun Yin, Jingtong Huang, Yixiao Zhu, Jiao Wang, Shuaiqi Qin and Yinghui Ling
    Citation: BMC Genomics 2021 22:577
    Content type: Research Published on:

  19. WRKY transcription factors are a superfamily of regulators involved in diverse biological processes and stress responses in plants. However, there is limited knowledge about the WRKY family in camelina (Camelina ...

    Authors: Yanan Song, Hongli Cui, Ying Shi, Jinai Xue, Chunli Ji, Chunhui Zhang, Lixia Yuan and Runzhi Li
    Citation: BMC Genomics 2020 21:786
    Content type: Research article Published on:

  20. Medicago truncatula, model legume and alfalfa relative, has served as an essential resource for advancing our understanding of legume physiology, functional genetics, and crop improvement traits. Necrotrophic fun...

    Authors: Jacob R. Botkin, Andrew D. Farmer, Nevin D. Young and Shaun J. Curtin
    Citation: BMC Genomics 2024 25:204
    Content type: Research Published on:

  21. Lentinula edodes is one of the most popular edible mushroom species in the world and contains useful medicinal components, such as lentinan. The light-induced formation of brown film on the vegetative mycelial ti...

    Authors: Seung-il Yoo, Hwa-Yong Lee, Kesavan Markkandan, Suyun Moon, Yong Ju Ahn, Sumin Ji, Junsu Ko, Seong-Jin Kim, Hojin Ryu and Chang Pyo Hong
    Citation: BMC Genomics 2019 20:121
    Content type: Research article Published on:

  22. Disease molecular complexity requires high throughput workflows to map disease pathways through analysis of vast tissue repositories. Great progress has been made in tissue multiomics analytical technologies. ...

    Authors: Scott A. Schactler, Stephen J. Scheuerman, Andrea Lius, William A. Altemeier, Dowon An, Thomas J. Matula, Michal Mikula, Maria Kulecka, Oleg Denisenko, Daniel Mar and Karol Bomsztyk
    Citation: BMC Genomics 2023 24:446
    Content type: Research Published on:

  23. The mechanical properties of wood are largely determined by the orientation of cellulose microfibrils in secondary cell walls. Several genes and their allelic variants have previously been found to affect micr...

    Authors: Xinguo Li, Harry X Wu and Simon G Southerton
    Citation: BMC Genomics 2011 12:480
    Content type: Research article Published on:

  24. It is common to get an optimal combination of markers for disease classification and prediction when multiple markers are available. Many approaches based on the area under the receiver operating characteristi...

    Authors: Wenbao Yu and Taesung Park
    Citation: BMC Genomics 2014 15(Suppl 10):S1
    Content type: Research Published on:

    This article is part of a Supplement: Volume 15 Supplement 10

  25. While DNA and RNA methods are routine to disrupt the expression of specific genes, complete understanding of developmental processes requires also protein methods, because: oocytes and early embryos accumulate...

    Authors: Steffen Israel, Ellen Casser, Hannes C.A. Drexler, Georg Fuellen and Michele Boiani
    Citation: BMC Genomics 2019 20:755
    Content type: Research article Published on:

  26. Cellular senescence can be induced by a variety of extrinsic stimuli, and sustained exposure to sunlight is a key factor in photoaging of the skin. Accordingly, irradiation of skin fibroblasts by UVB light tri...

    Authors: Ruth Greussing, Matthias Hackl, Pornpimol Charoentong, Alexander Pauck, Rossella Monteforte, Maria Cavinato, Edith Hofer, Marcel Scheideler, Michael Neuhaus, Lucia Micutkova, Christoph Mueck, Zlatko Trajanoski, Johannes Grillari and Pidder Jansen-Dürr
    Citation: BMC Genomics 2013 14:224
    Content type: Research article Published on:

  27. Ovulation rate and litter size are important reproductive traits in sheep with high economic value. Recent work has revealed a potential link between DNA methylation and prolificacy. However, a genome-wide stu...

    Authors: Yanli Zhang, Fengzhe Li, Xu Feng, Hua Yang, Aoxiang Zhu, Jing Pang, Le Han, Tingting Zhang, Xiaolei Yao and Feng Wang
    Citation: BMC Genomics 2017 18:759
    Content type: Research article Published on:

  28. Common cutworm (CCW) is highly responsible for destabilizing soybean productivity. Wild soybean is a resource used by breeders to discover elite defensive genes.

    Authors: Haiping Du, Xiao Li, Lihua Ning, Rui Qin, Qing Du, Qing Wang, Haina Song, Fang Huang, Hui Wang and Deyue Yu
    Citation: BMC Genomics 2019 20:237
    Content type: Research article Published on:

  29. Marfan syndrome (MFS) is a heritable connective tissue disorder caused by mutations in the fibrillin-1 gene. This syndrome constitutes a significant identifiable subtype of aortic aneurysmal disease, accountin...

    Authors: Zizhen Yao, Jochen C Jaeger, Walter L Ruzzo, Cecile Z Morale, Mary Emond, Uta Francke, Dianna M Milewicz, Stephen M Schwartz and Eileen R Mulvihill
    Citation: BMC Genomics 2007 8:319
    Content type: Research article Published on:

  31. Social plasticity is a pervasive feature of animal behavior. Animals adjust the expression of their social behavior to the daily changes in social life and to transitions between life-history stages, and this ...

    Authors: José M Simões, Eduardo N Barata, Rayna M Harris, Lauren A O’Connell, Hans A Hofmann and Rui F Oliveira
    Citation: BMC Genomics 2015 16:114
    Content type: Research article Published on:

  32. Mating induces behavioral and physiological changes in the arbovirus vector Aedes aegypti, including stimulation of egg development and oviposition, increased survival, and reluctance to re-mate with subsequent m...

    Authors: I. Alexandra Amaro, Yasir H. Ahmed-Braimah, Garrett P. League, Sylvie A. Pitcher, Frank W. Avila, Priscilla C. Cruz, Laura C. Harrington and Mariana F. Wolfner
    Citation: BMC Genomics 2021 22:896
    Content type: Research Published on:

  33. Alternative splicing (AS) is an important channel for gene expression regulation and protein diversification, in addition to a major reason for the considerable differences in the number of genes and proteins ...

    Authors: Cong Gao, Shuai Lu, Rong Zhou, Junjie Ding, Jialiang Fan, Binying Han, Moxian Chen, Baohua Wang and Yunying Cao
    Citation: BMC Genomics 2022 23:744
    Content type: Research Published on:

  34. The genetics of development in the nematode Caenorhabditis elegans has been described in exquisite detail. The phylum Nematoda has two classes: Chromadorea (which includes C. elegans) and the Enoplea. While the d...

    Authors: Philipp H Schiffer, Michael Kroiher, Christopher Kraus, Georgios D Koutsovoulos, Sujai Kumar, Julia I R Camps, Ndifon A Nsah, Dominik Stappert, Krystalynne Morris, Peter Heger, Janine Altmüller, Peter Frommolt, Peter Nürnberg, W Kelley Thomas, Mark L Blaxter and Einhard Schierenberg
    Citation: BMC Genomics 2013 14:923
    Content type: Research article Published on:

  35. A pig phenotype characterized by juvenile hairlessness, thin skin and age dependent lung emphysema has been discovered in a Danish pig herd. The trait shows autosomal co-dominant inheritance with all three gen...

    Authors: Camilla S Bruun, Claus B Jørgensen, Lene Bay, Susanna Cirera, Henrik E Jensen, Páll S Leifsson, Jens Nielsen, Knud Christensen and Merete Fredholm
    Citation: BMC Genomics 2008 9:283
    Content type: Research article Published on:

  36. Diabetes mellitus characterized by hyperglycemia as a result of insufficient production of or reduced sensitivity to insulin poses a growing threat to the health of people. It is a heterogeneous disorder with ...

    Authors: Xiwei Tang, Xiaohua Hu, Xuejun Yang, Yetian Fan, Yongfan Li, Wei Hu, Yongzhong Liao, Ming cai Zheng, Wei Peng and Li Gao
    Citation: BMC Genomics 2016 17(Suppl 4):433
    Content type: Research Published on:

    This article is part of a Supplement: Volume 17 Supplement 4

  37. Clostridium difficile is an anaerobic, Gram-positive bacterium that can reside as a commensal within the intestinal microbiota of healthy individuals or cause life-threatening antibiotic-associated diarrhea in im...

    Authors: Laura J Pettit, Hilary P Browne, Lu Yu, Wiep Klaas Smits, Robert P Fagan, Lars Barquist, Melissa J Martin, David Goulding, Sylvia H Duncan, Harry J Flint, Gordon Dougan, Jyoti S Choudhary and Trevor D Lawley
    Citation: BMC Genomics 2014 15:160
    Content type: Research article Published on:

  38. Microspore embryogenesis is an extraordinarily complicated process, comprehensively regulated by a composite network of physiological and molecular factors, among which hormone is one of the most crucial facto...

    Authors: Chenggang Wang, Peiyu Zhang, Yun He, Furong Huang, Xu Wang, Hong Li, Lingyun Yuan, Jinfeng Hou, Guohu Chen, Wenjie Wang, Jianqiang Wu and Xiaoyan Tang
    Citation: BMC Genomics 2023 24:380
    Content type: Research Published on:

  40. Meat type chickens have limited capacities to cope with high environmental temperatures, this sometimes leading to mortality on farms and subsequent economic losses. A strategy to alleviate this problem is to ...

    Authors: Thomas Loyau, Christelle Hennequet-Antier, Vincent Coustham, Cécile Berri, Marie Leduc, Sabine Crochet, Mélanie Sannier, Michel Jacques Duclos, Sandrine Mignon-Grasteau, Sophie Tesseraud, Aurélien Brionne, Sonia Métayer-Coustard, Marco Moroldo, Jérôme Lecardonnel, Patrice Martin, Sandrine Lagarrigue…
    Citation: BMC Genomics 2016 17:329
    Content type: Research article Published on:

  41. Xanthomonas is a genus of gram-negative bacterium containing more than 35 species. Among these pathogenic species, Xanthomonas albilineans (Xal) is of global interest, responsible for leaf scald disease in sugarc...

    Authors: MeiLin Li, YiXue Bao, YiSha Li, Sehrish Akbar, GuangYue Wu, JinXia Du, Ronghui Wen, Baoshan Chen and MuQing Zhang
    Citation: BMC Genomics 2022 23:671
    Content type: Research Published on:

  42. The transition from embryonic to posthatch development in the chicken represents a massive metabolic switch from primarily lipolytic to primarily lipogenic metabolism. This metabolic switch is essential for th...

    Authors: Julie A. Hicks, Tom E. Porter and Hsiao-Ching Liu
    Citation: BMC Genomics 2017 18:687
    Content type: Research article Published on:

  43. Cucurbita pepo belongs to the Cucurbitaceae family. The "Zucchini" types rank among the highest-valued vegetables worldwide, and other C. pepo and related Cucurbita spp., are food staples and rich sources of fat ...

    Authors: José Blanca, Joaquín Cañizares, Cristina Roig, Pello Ziarsolo, Fernando Nuez and Belén Picó
    Citation: BMC Genomics 2011 12:104
    Content type: Research article Published on:

  44. Identifying pathogen virulence genes required to cause disease is crucial to understand the mechanisms underlying the pathogenic process. Plasmid insertion mutagenesis of fungal protoplasts is frequently used ...

    Authors: Martin Urban, Robert King, Keywan Hassani-Pak and Kim E Hammond-Kosack
    Citation: BMC Genomics 2015 16:261
    Content type: Methodology article Published on:

  45. Genes containing the SET domain can catalyse histone lysine methylation, which in turn has the potential to cause changes to chromatin structure and regulation of the transcription of genes involved in diverse...

    Authors: Vithusan Suppiyar, Venkata Suresh Bonthala, Asis Shrestha, Stephanie Krey and Benjamin Stich
    Citation: BMC Genomics 2024 25:442
    Content type: Research Published on:

  46. Local adaptation is a key evolutionary process that enhances the growth of plants in their native habitat compared to non-native habitats, resulting in patterns of adaptive genetic variation across the entire ...

    Authors: Joanna Meger, Bartosz Ulaszewski, Daniel J. Chmura and Jarosław Burczyk
    Citation: BMC Genomics 2024 25:78
    Content type: Research Published on:

  48. The investigation of molecular mechanisms involved in polysaccharides and saponin metabolism is critical for genetic engineering of Polygonatum cyrtonema Hua to raise major active ingredient content. Up to now, t...

    Authors: Dandan Li, Qing Wang, Songshu Chen, Hongchang Liu, Keqin Pan, Jinling Li, Chunli Luo and Hualei Wang
    Citation: BMC Genomics 2022 23:195
    Content type: Research Published on:

  50. The Ambrosia Fusarium Clade phytopathogenic Fusarium fungi species have a symbiotic relationship with ambrosia beetles in the genus Euwallacea (Coleoptera: Curculionidae). Related beetle species referred to as Eu...

    Authors: Diana Sánchez-Rangel, Eric-Edmundo Hernández-Domínguez, Claudia-Anahí Pérez-Torres, Randy Ortiz-Castro, Emanuel Villafán, Benjamín Rodríguez-Haas, Alexandro Alonso-Sánchez, Abel López-Buenfil, Nayeli Carrillo-Ortiz, Lervin Hernández-Ramos and Enrique Ibarra-Laclette
    Citation: BMC Genomics 2018 19:721
    Content type: Research article Published on:

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BMC Genomics

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