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  2. Luman is a member of CREB3 (cAMP responsive element-binding) subfamily of the basic leucine-zipper (bZIP) transcription factors. It may play an important regulatory role during the decidualization process sinc...

    Authors: Fan Zhao, Huan Liu, Nan Wang, Lijun Yu, Aihua Wang, Yanglei Yi and Yaping Jin

    Citation: BMC Genomics 2020 21:103

    Content type: Research article

    Published on:

  3. Neutrophils are the first effectors of inflammatory response triggered by mastitis infection, and are important defense cells against pathogenic Escherichia coli (E. coli). DNA methylation, as a critical epigenet...

    Authors: Zhihua Ju, Qiang Jiang, Jinpeng Wang, Xiuge Wang, Chunhong Yang, Yan Sun, Yaran Zhang, Changfa Wang, Yaping Gao, Xiaochao Wei, Minghai Hou and Jinming Huang

    Citation: BMC Genomics 2020 21:102

    Content type: Research article

    Published on:

  4. Rhodnius prolixus has become a model for revealing the molecular bases of insect sensory biology due to the publication of its genome and its well-characterized behavioural repertoire. Gene expression modulation ...

    Authors: Jose Manuel Latorre-Estivalis, Marcos Sterkel, Sheila Ons and Marcelo Gustavo Lorenzo

    Citation: BMC Genomics 2020 21:101

    Content type: Research article

    Published on:

  6. Sustainability challenges are currently hampering an increase in salmon production. Using sterile salmon can solve problems with precocious puberty and genetic introgression from farmed escapees to wild popula...

    Authors: Lene Kleppe, Rolf Brudvik Edvardsen, Tomasz Furmanek, Eva Andersson, Kai Ove Skaftnesmo, Frida Thyri Segafredo and Anna Wargelius

    Citation: BMC Genomics 2020 21:99

    Content type: Research article

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  9. Broomcorn millet is a drought-tolerant cereal that is widely cultivated in the semiarid regions of Asia, Europe, and other continents; however, the mechanisms underlying its drought-tolerance are poorly unders...

    Authors: Zhongying Shan, Yanmiao Jiang, Haiquan Li, Jinjie Guo, Ming Dong, Jianan Zhang and Guoqing Liu

    Citation: BMC Genomics 2020 21:96

    Content type: Research article

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  11. PLINK is probably the most used program for analyzing SNP genotypes and runs of homozygosity (ROH), both in human and in animal populations. The last decade, ROH analyses have become the state-of-the-art metho...

    Authors: R. Meyermans, W. Gorssen, N. Buys and S. Janssens

    Citation: BMC Genomics 2020 21:94

    Content type: Methodology article

    Published on:

  12. Whiteflies are a threat to cassava (Manihot esculenta), an important staple food in many tropical/subtropical regions. Understanding the molecular mechanisms regulating cassava’s responses against this pest is cr...

    Authors: Maria L. Irigoyen, Danielle C. Garceau, Adriana Bohorquez-Chaux, Luis Augusto Becerra Lopez-Lavalle, Laura Perez-Fons, Paul D. Fraser and Linda L. Walling

    Citation: BMC Genomics 2020 21:93

    Content type: Research article

    Published on:

  13. Aldrichina grahami (Diptera: Calliphoridae) is a forensically important fly, which has been widely applied to practical legal investigations. Unlike other necrophagous flies, A. grahami exhibits cold tolerance wh...

    Authors: Zhuoying Liu, Han Han, Fanming Meng, Yangshuai Jiang and Jifeng Cai

    Citation: BMC Genomics 2020 21:92

    Content type: Research article

    Published on:

  14. Plant NADPH oxidase (NOX), also known as respiratory burst oxidase homolog (rboh), encoded by the rboh gene, is a key enzyme in the reactive oxygen species (ROS) metabolic network. It catalyzes the formation of t...

    Authors: Wei Wang, Dongdong Chen, Dan Liu, Yingying Cheng, Xiaopei Zhang, Lirong Song, Mengjiao Hu, Jie Dong and Fafu Shen

    Citation: BMC Genomics 2020 21:91

    Content type: Research article

    Published on:

  15. Truffles are symbiotic fungi that develop underground in association with plant roots, forming ectomycorrhizae. They are primarily known for the organoleptic qualities of their hypogeous fruiting bodies. Prima...

    Authors: Federico Vita, Beatrice Giuntoli, Edoardo Bertolini, Cosimo Taiti, Elettra Marone, Chiara D’Ambrosio, Emanuela Trovato, Danilo Sciarrone, Mariosimone Zoccali, Raffaella Balestrini, Andrea Scaloni, Luigi Mondello, Stefano Mancuso, Massimo Alessio and Amedeo Alpi

    Citation: BMC Genomics 2020 21:90

    Content type: Research article

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  16. Copy Number Variations (CNVs) are gain or loss of DNA segments that are known to play a role in shaping a wide range of phenotypes. In this study, we used two dairy cattle populations, Holstein Friesian and Je...

    Authors: Young-Lim Lee, Mirte Bosse, Erik Mullaart, Martien A. M. Groenen, Roel F. Veerkamp and Aniek C. Bouwman

    Citation: BMC Genomics 2020 21:89

    Content type: Research article

    Published on:

  19. Branch points (BPs) map within short motifs upstream of acceptor splice sites (3’ss) and are essential for splicing of pre-mature mRNA. Several BP-dedicated bioinformatics tools, including HSF, SVM-BPfinder, B...

    Authors: Raphaël Leman, Hélène Tubeuf, Sabine Raad, Isabelle Tournier, Céline Derambure, Raphaël Lanos, Pascaline Gaildrat, Gaia Castelain, Julie Hauchard, Audrey Killian, Stéphanie Baert-Desurmont, Angelina Legros, Nicolas Goardon, Céline Quesnelle, Agathe Ricou, Laurent Castera…

    Citation: BMC Genomics 2020 21:86

    Content type: Research article

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  20. Next generation sequencing (NGS) has become a universal practice in modern molecular biology. As the throughput of sequencing experiments increases, the preparation of conventional multiplexed libraries become...

    Authors: Jennifer Chiniquy, Megan E. Garber, Aindrila Mukhopadhyay and Nathan J. Hillson

    Citation: BMC Genomics 2020 21:85

    Content type: Methodology article

    Published on:

  21. Environmental variation in the amount of resources available to populations challenge individuals to optimize the allocation of those resources to key fitness functions. This coordination of resource allocatio...

    Authors: E. Ng’oma, P. A. Williams-Simon, A. Rahman and E. G. King

    Citation: BMC Genomics 2020 21:84

    Content type: Research article

    Published on:

  22. Following the publication of this article [1], it was noted that due to a typesetting error the figure legends were paired incorrectly.

    Authors: Everlyn Kamau, John W. Oketch, Zaydah R. de Laurent, My V. T. Phan, Charles N. Agoti, D. James Nokes and Matthew Cotten

    Citation: BMC Genomics 2020 21:83

    Content type: Correction

    Published on:

    The original article was published in BMC Genomics 2020 21:5

  23. Following the publication of this article [1], the authors reported that the captions of Figs. 2 and 3 were published in the incorrect order, whereby they mismatch with their corresponding images. The figures ...

    Authors: Sivasubramanian Rajarammohan, Kumar Paritosh, Deepak Pental and Jagreet Kaur

    Citation: BMC Genomics 2020 21:82

    Content type: Correction

    Published on:

    The original article was published in BMC Genomics 2019 20:1036

  24. Zanthoxylum armatum (Z. armatum) is a highly economically important tree that presents a special numbing taste. However, the underlying regulatory mechanism of the numbing taste remains poorly understood. Thus, t...

    Authors: Wen-Kai Hui, Fei-Yan Zhao, Jing-Yan Wang, Xiao-Yang Chen, Jue-Wei Li, Yu Zhong, Hong-Yun Li, Jun-Xing Zheng, Liang-Zhen Zhang, Qing-Min Que, Ai-Min Wu and Wei Gong

    Citation: BMC Genomics 2020 21:81

    Content type: Research article

    Published on:

  25. Mixed infections of Mycobacterium tuberculosis and antibiotic heteroresistance continue to complicate tuberculosis (TB) diagnosis and treatment. Detection of mixed infections has been limited to molecular genotyp...

    Authors: Christine Anyansi, Arlin Keo, Bruce J. Walker, Timothy J. Straub, Abigail L. Manson, Ashlee M. Earl and Thomas Abeel

    Citation: BMC Genomics 2020 21:80

    Content type: Research article

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  26. Contamination of reagents and cross contamination across samples is a long-recognized issue in molecular biology laboratories. While often innocuous, contamination can lead to inaccurate results. Cantalupo et al.

    Authors: Sara R. Selitsky, David Marron, Daniel Hollern, Lisle E. Mose, Katherine A. Hoadley, Corbin Jones, Joel S. Parker, Dirk P. Dittmer and Charles M. Perou

    Citation: BMC Genomics 2020 21:79

    Content type: Research article

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  27. Paspalum notatum exhibits both sexual and apomictic cytotypes and, thus, is considered a good model for studies of apomixis because it facilitates comparative approaches. In this work, transcriptome sequencing wa...

    Authors: Fernanda A. de Oliveira, Bianca B. Z. Vigna, Carla C. da Silva, Alessandra P. Fávero, Frederico P. de Matta, Ana L. S. Azevedo and Anete P. de Souza

    Citation: BMC Genomics 2020 21:78

    Content type: Research article

    Published on:

  28. This study used a genome-wide screen of gene expression to better understand the metabolic and functional differences between commercially valuable intramuscular fat (IMF) and commercially wasteful subcutaneou...

    Authors: Nicholas J. Hudson, Antonio Reverter, William J. Griffiths, Eylan Yutuc, Yuqin Wang, Angela Jeanes, Sean McWilliam, David W. Pethick and Paul L. Greenwood

    Citation: BMC Genomics 2020 21:77

    Content type: Research article

    Published on:

  29. Duckweeds (Lemnaceae) are aquatic plants distributed all over the world. The chloroplast genome, as an efficient solar-powered reactor, is an invaluable resource to study biodiversity and to carry foreign genes. ...

    Authors: Yating Zhang, Dong An, Changsheng Li, Zhixuan Zhao and Wenqin Wang

    Citation: BMC Genomics 2020 21:76

    Content type: Research article

    Published on:

  30. High-throughput RNA sequencing (RNA-seq) has evolved as an important analytical tool in molecular biology. Although the utility and importance of this technique have grown, uncertainties regarding the proper a...

    Authors: Xiaohong Li, Nigel G. F. Cooper, Timothy E. O’Toole and Eric C. Rouchka

    Citation: BMC Genomics 2020 21:75

    Content type: Research article

    Published on:

  31. Spermatogenesis is an intricate process regulated by a finely organized network. The orange-spotted grouper (Epinephelus coioides) is a protogynous hermaphroditic fish, but the regulatory mechanism of its spermat...

    Authors: Xi Wu, Yang Yang, Chaoyue Zhong, Yin Guo, Shuisheng Li, Haoran Lin and Xiaochun Liu

    Citation: BMC Genomics 2020 21:73

    Content type: Research article

    Published on:

  32. Calcium-dependent protein kinase (CPK) is one of the main Ca2+ combined protein kinase that play significant roles in plant growth, development and response to multiple stresses. Despite an important member of th...

    Authors: Man Zhang, Yanhui Liu, Qing He, Mengnan Chai, Youmei Huang, Fangqian Chen, Xiaomei Wang, Yeqiang Liu, Hanyang Cai and Yuan Qin

    Citation: BMC Genomics 2020 21:72

    Content type: Research article

    Published on:

  33. Most aphids exhibit wing polyphenism in which wingless and winged morphs produce depending on the population density and host plant quality. Although the influence of environmental factors on wing polyphenism ...

    Authors: Yinjun Fan, Xiuxia Li, Abd Allah A. H. Mohammed, Ying Liu and Xiwu Gao

    Citation: BMC Genomics 2020 21:71

    Content type: Research article

    Published on:

  34. Mycoplasma bovis is an important etiologic agent of bovine mycoplasmosis affecting cattle production and animal welfare. In the past in Israel, M. bovis has been most frequently associated with bovine respiratory...

    Authors: Yael Yair, Ilya Borovok, Inna Mikula, Rama Falk, Larry K. Fox, Uri Gophna and Inna Lysnyansky

    Citation: BMC Genomics 2020 21:70

    Content type: Research article

    Published on:

  35. Members of the AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED (AHL) family are involved in various plant biological processes via protein-DNA and protein-protein interaction. However, no the systematic identification...

    Authors: Lanjie Zhao, Youjun Lü, Wei Chen, Jinbo Yao, Yan Li, Qiulin Li, Jingwen Pan, Shengtao Fang, Jie Sun and Yongshan Zhang

    Citation: BMC Genomics 2020 21:69

    Content type: Research article

    Published on:

  36. Global climate change is predicted to force the bathymetric migrations of shallow-water marine invertebrates. Hydrostatic pressure is proposed to be one of the major environmental factors limiting the vertical...

    Authors: Linying Liang, Jiawei Chen, Yanan Li and Haibin Zhang

    Citation: BMC Genomics 2020 21:68

    Content type: Research article

    Published on:

  37. Gene targeting by homology-directed repair (HDR) can precisely edit the genome and is a versatile tool for biomedical research. However, the efficiency of HDR-based modification is still low in many model orga...

    Authors: Haipeng Bai, Lijun Liu, Ke An, Xiaochan Lu, Michael Harrison, Yanqiu Zhao, Ruibin Yan, Zhijie Lu, Song Li, Shuo Lin, Fang Liang and Wei Qin

    Citation: BMC Genomics 2020 21:67

    Content type: Methodology article

    Published on:

  38. Houseflies (Musca domestica L.) live in intimate association with numerous microorganisms and is a vector of human pathogens. In temperate areas, houseflies will overwinter in environments constructed by humans a...

    Authors: Simon Bahrndorff, Aritz Ruiz-González, Nadieh de Jonge, Jeppe Lund Nielsen, Henrik Skovgård and Cino Pertoldi

    Citation: BMC Genomics 2020 21:66

    Content type: Research article

    Published on:

  39. Alternative splicing (AS) may generate multiple mRNA splicing isoforms from a single mRNA precursor using different splicing sites, leading to enhanced diversity of transcripts and proteins. AS has been implic...

    Authors: Yeyun Li, Xiaozeng Mi, Shiqi Zhao, Junyan Zhu, Rui Guo, Xiaobo Xia, Lu Liu, Shengrui Liu and Chaoling Wei

    Citation: BMC Genomics 2020 21:65

    Content type: Research article

    Published on:

  40. The advent of Next Generation Sequencing has allowed transcriptomes to be profiled with unprecedented accuracy, but the high costs of full-length mRNA sequencing have posed a limit on the accessibility and sca...

    Authors: Gabriel Sholder, Thomas A. Lanz, Robert Moccia, Jie Quan, Estel Aparicio-Prat, Robert Stanton and Hualin S. Xi

    Citation: BMC Genomics 2020 21:64

    Content type: Methodology article

    Published on:

  41. As a major threat to the oyster industry, Pacific Oyster Mortality Syndrome (POMS) is a polymicrobial disease affecting the main oyster species farmed across the world. POMS affects oyster juveniles and became...

    Authors: Julien de Lorgeril, Bruno Petton, Aude Lucasson, Valérie Perez, Pierre-Louis Stenger, Lionel Dégremont, Caroline Montagnani, Jean-Michel Escoubas, Philippe Haffner, Jean-François Allienne, Marc Leroy, Franck Lagarde, Jérémie Vidal-Dupiol, Yannick Gueguen and Guillaume Mitta

    Citation: BMC Genomics 2020 21:63

    Content type: Research article

    Published on:

  42. The APETALA2/ethylene responsive factor (AP2/ERF) superfamily members are transcription factors that regulate diverse developmental processes and stress responses in plants. They have been identified in many p...

    Authors: Shuting Zhang, Chen Zhu, Yumeng Lyu, Yan Chen, Zihao Zhang, Zhongxiong Lai and Yuling Lin

    Citation: BMC Genomics 2020 21:62

    Content type: Research article

    Published on:

  43. Structural variations (SVs) have been reported to play an important role in genetic diversity and trait regulation. Many computer algorithms detecting SVs have recently been developed, but the use of multiple ...

    Authors: Yueyuan Liu, Mingyue Zhang, Jieying Sun, Wenjing Chang, Manyi Sun, Shaoling Zhang and Jun Wu

    Citation: BMC Genomics 2020 21:61

    Content type: Research article

    Published on:

  44. Lactoferrampin (LFampin), Lactoferricin (LFcin), and LFchimera are three well-known antimicrobial peptides derived from Lactoferrin and proposed as alternatives for antibiotics. Although the intracellular acti...

    Authors: Zana Pirkhezranian, Mojtaba Tahmoorespur, Xavier Daura, Hassan Monhemi and Mohammad Hadi Sekhavati

    Citation: BMC Genomics 2020 21:60

    Content type: Research article

    Published on:

  45. Reproductive capacity can be altered by challenges experienced during critical periods of development, including fetal development and early neonatal life. Gossypol is a polyphenolic compound, commonly found i...

    Authors: Helder Louvandini, Patricia S. Corrêa, Rocío Amorín, Lihe Liu, Egon H. Ieda, Carolina R. Jimenez, Siu M. Tsai, Concepta M. McManus and Francisco Peñagaricano

    Citation: BMC Genomics 2020 21:59

    Content type: Research article

    Published on:

  46. Fatty acid composition contributes greatly to the quality and nutritional value of meat. However, the molecular regulatory mechanisms underlying fatty acid accumulation in poultry have not yet been cleared. Th...

    Authors: Wenlei Fan, Wenjing Liu, Hehe Liu, Qingshi Meng, Yaxi Xu, Yuming Guo, Baowei Wang, Zhengkui Zhou and Shuisheng Hou

    Citation: BMC Genomics 2020 21:58

    Content type: Research article

    Published on:

  47. Candida albicans is an opportunistic pathogenic yeast, which could become pathogenic in various stressful environmental factors including the spaceflight environment. In this study, we aim to explore the phenotyp...

    Authors: Jiaping Wang, Yu Liu, Guangxian Zhao, Jianyi Gao, Junlian Liu, Xiaorui Wu, Chong Xu and Yongzhi Li

    Citation: BMC Genomics 2020 21:57

    Content type: Research article

    Published on:

  48. Shotgun metagenomic sequencing reveals the potential in microbial communities. However, lower-cost 16S ribosomal RNA (rRNA) gene sequencing provides taxonomic, not functional, observations. To remedy this, we ...

    Authors: Nicole R. Narayan, Thomas Weinmaier, Emilio J. Laserna-Mendieta, Marcus J. Claesson, Fergus Shanahan, Karim Dabbagh, Shoko Iwai and Todd Z. DeSantis

    Citation: BMC Genomics 2020 21:56

    Content type: Research article

    Published on:

    The Correction to this article has been published in BMC Genomics 2020 21:105

  49. Following the publication of this article [1], the authors reported that the captions of Figs. 3 and 4 were published in the incorrect order, whereby they mismatch with their corresponding images.

    Authors: Robert Bücking, Murray P. Cox, Georgi Hudjashov, Lauri Saag, Herawati Sudoyo and Mark Stoneking

    Citation: BMC Genomics 2020 21:55

    Content type: Correction

    Published on:

    The original article was published in BMC Genomics 2019 20:1017

  50. Following the publication of the original article [1], it was reported that the accession number given in the ‘Data accessibility’ declaration, GSE65696, is incorrect.

    Authors: Zhaowei Cai, Xiaoling Jiang, Yongming Pan, Liang Chen, Lifan Zhang, Keyan Zhu, Yueqin Cai, Yun Ling, Fangming Chen, Xiaoping Xu and Minli Chen

    Citation: BMC Genomics 2020 21:51

    Content type: Correction

    Published on:

    The original article was published in BMC Genomics 2015 16:59

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