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6358 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 82 of 128

  1. Streptococcus agalactiae is a major cause of bovine mastitis, which is the dominant health disorder affecting milk production within the dairy industry and is responsible for substantial financial losses to the i...

    Authors: Vincent P Richards, Sang Chul Choi, Paulina D Pavinski Bitar, Abhijit A Gurjar and Michael J Stanhope
    Citation: BMC Genomics 2013 14:920
    Content type: Research article Published on:

  2. Pseudomonas aeruginosa is a genetically complex bacterium which can adopt and switch between a free-living or biofilm lifestyle, a versatility that enables it to thrive in many different environments and contribu...

    Authors: Richard D Waite, Alberto Paccanaro, Anastasia Papakonstantinopoulou, Jacob M Hurst, Mansoor Saqi, Eddie Littler and Michael A Curtis
    Citation: BMC Genomics 2006 7:162
    Content type: Research article Published on:

  3. Hu sheep (HS), a breed of sheep carrying the FecB mutation gene, is known for its “year-round estrus and multiple births” and is an ideal model for studying the high fecundity mechanisms of livestock. Through ana...

    Authors: Tao Zhong, Dunying Hou, Qianjun Zhao, Siyuan Zhan, Linjie Wang, Li Li, Hongping Zhang, Wei Zhao, Shizhong Yang and Lili Niu
    Citation: BMC Genomics 2024 25:480
    Content type: Research Published on:

  4. Vitis vinifera (grape) is one of the most economically significant fruit crops in the world. The availability of the recently released grape genome sequence offers an opportunity to identify and analyze some impo...

    Authors: Jun Cao, Xi Han, Ticao Zhang, Yongping Yang, Jinling Huang and Xiangyang Hu
    Citation: BMC Genomics 2014 15:1116
    Content type: Research article Published on:

  5. In bacteria, non-coding RNAs (ncRNA) are crucial regulators of gene expression, controlling various stress responses, virulence, and motility. Previous work revealed a relatively high number of ncRNAs in some ...

    Authors: Björn Voß, Jens Georg, Verena Schön, Susanne Ude and Wolfgang R Hess
    Citation: BMC Genomics 2009 10:123
    Content type: Research article Published on:

  7. Fish scales are typical products of biomineralization and play an important role in the adaptation of fish to their environment. The Gymnocypris przewalskii scales are highly specialized, with scales embedded in ...

    Authors: Baoke Xu, Yanrong Cui, Linlin A., Haichen Zhang, Qinghua Ma, Fulei Wei and Jian Liang
    Citation: BMC Genomics 2024 25:140
    Content type: Research Published on:

  9. B-box (BBX) proteins play important roles in plant growth regulation and development including photomorphogenesis, photoperiodic regulation of flowering, and responses to biotic and abiotic stresses.

    Authors: Abdullah Shalmani, Xiu-Qing Jing, Yi Shi, Izhar Muhammad, Meng-Ru Zhou, Xiao-Yong Wei, Qiong-Qiong Chen, Wen-Qiang Li, Wen-Ting Liu and Kun-Ming Chen
    Citation: BMC Genomics 2019 20:27
    Content type: Research article Published on:

  11. MicroRNAs (miRNAs) regulate gene expression by binding to mRNA transcripts in various biological processes. In mammals and birds, miRNAs are known to play vital parts in both host immune defense and viral infe...

    Authors: Bao-cun Zhang, Jian Zhang and Li Sun
    Citation: BMC Genomics 2014 15:878
    Content type: Research article Published on:

  12. De novo heterozygous assembly is an ongoing challenge requiring improved assembly approaches. In this study, three strategies were used to develop de novo Vitis vinifera ‘Sultanina’ genome assemblies for comparis...

    Authors: Sagar Patel, Zhixiu Lu, Xiaozhu Jin, Padmapriya Swaminathan, Erliang Zeng and Anne Y. Fennell
    Citation: BMC Genomics 2018 19:57
    Content type: Research article Published on:

  13. Polar overdominance at the ovine callipyge (CLPG) locus involves the post-transcriptional trans-inhibition of DLK1 in skeletal muscle of CLPG/CLPG sheep. The abundant maternally expressed microRNAs (miRNAs) mappi...

    Authors: Huijun Cheng, Xuewen Xu, Tracy Hadfield, Noelle Cockett, Carole Charlier, Michel Georges and Haruko Takeda
    Citation: BMC Genomics 2014 15:944
    Content type: Research article Published on:

  14. Field pea (Pisum sativum L.) is a cool-season grain legume that is cultivated world-wide for both human consumption and stock-feed purposes. Enhancement of genetic and genomic resources for field pea will permit ...

    Authors: Shimna Sudheesh, Timothy I. Sawbridge, Noel OI Cogan, Peter Kennedy, John W. Forster and Sukhjiwan Kaur
    Citation: BMC Genomics 2015 16:611
    Content type: Research article Published on:

  15. Congenital heart defects (CHD) are structural defects of the heart affecting approximately 1% of newborns. They exhibit low penetrance and non-Mendelian patterns of inheritance as varied and complex traits. Wh...

    Authors: Martin Broberg, Minna Ampuja, Samuel Jones, Tiina Ojala, Otto Rahkonen, Riikka Kivelä, James Priest, Aarno Palotie, Hanna M. Ollila and Emmi Helle
    Citation: BMC Genomics 2024 25:256
    Content type: Research Published on:

  16. A high caloric diet, in conjunction with low levels of physical activity, promotes obesity. Many studies are available regarding the relation between dietary saturated fats and the etiology of obesity, but mos...

    Authors: Tenzin Nyima, Michael Müller, Guido J. E. J. Hooiveld, Melissa J. Morine and Marco Scotti
    Citation: BMC Genomics 2016 17:106
    Content type: Research article Published on:

  17. Campylobacter jejuni is the leading cause of bacterial gastroenteritis in humans and the handling or consumption of contaminated poultry meat is a key source of infection. Selective breeding of poultry that exhib...

    Authors: Kay M. Russell, Jacqueline Smith, Abi Bremner, Cosmin Chintoan-Uta, Lonneke Vervelde, Androniki Psifidi and Mark P. Stevens
    Citation: BMC Genomics 2021 22:411
    Content type: Research Published on:

  18. The fight against grapevine diseases due to biotrophic pathogens usually requires the massive use of chemical fungicides with harmful environmental effects. An alternative strategy could be the use of compound...

    Authors: Marie-Cécile Dufour, Noël Magnin, Bernard Dumas, Sophie Vergnes and Marie-France Corio-Costet
    Citation: BMC Genomics 2016 17:957
    Content type: Research article Published on:

  19. Transmissible spongiform encephalopathies (TSEs) or prion diseases are fatal neurodegenerative disorders which occur in humans and various animal species. Examples include Creutzfeldt-Jakob disease (CJD) in hu...

    Authors: Pamela J Skinner, Hayet Abbassi, Bruce Chesebro, Richard E Race, Cavan Reilly and Ashley T Haase
    Citation: BMC Genomics 2006 7:114
    Content type: Research article Published on:

  20. Skeletal muscle development and fat deposition have important effects on meat quality. The study of regulating skeletal muscle development and fat deposition is of great significance in improving the quality o...

    Authors: Mingyue Shi, Shuai Yang, Xiaolei Zhao, Di Sun, Yifei Li, Jingxian Yang, Meng Li, Chunbo Cai, Xiaohong Guo, Bugao Li, Chang Lu and Guoqing Cao
    Citation: BMC Genomics 2024 25:530
    Content type: Research Published on:

  22. Comparative transcriptomics and functional studies of different Saccharomyces species have opened up the possibility of studying and understanding new yeast abilities. This is the case of yeast adaptation to stre...

    Authors: Jordi Tronchoni, Victor Medina, Jose Manuel Guillamón, Amparo Querol and Roberto Pérez-Torrado
    Citation: BMC Genomics 2014 15:432
    Content type: Research article Published on:

  23. Understanding mechanisms that contribute to viral dissemination in mosquito vectors will contribute to our ability to interfere with the transmission of viral pathogens that impact public health. The expressio...

    Authors: Dongyoung Shin, Ayse Civana, Carolina Acevedo and Chelsea T Smartt
    Citation: BMC Genomics 2014 15:513
    Content type: Research article Published on:

  24. The coordination of group behaviors in bacteria is achieved by a cell-cell signaling process called quorum sensing (QS). QS is an intercellular communication system, which synchronously controls expression of ...

    Authors: Miriam Khider, Erik Hjerde, Hilde Hansen and Nils Peder Willassen
    Citation: BMC Genomics 2019 20:220
    Content type: Research article Published on:

  25. The glyoxalase system includes glyoxalase I (GLXI), glyoxalase II (GLXII) and glyoxalase III (GLXIII), which are responsible for methylglyoxal (MG) detoxification and involved in abiotic stress responses such ...

    Authors: Menglin Xu, Dongyun Zuo, Qiaolian Wang, Limin Lv, Youping Zhang, Huixin Jiao, Xiang Zhang, Yi Yang, Guoli Song and Hailiang Cheng
    Citation: BMC Genomics 2023 24:474
    Content type: Research Published on:

  26. The study of protein complexes and protein functional modules has become an important method to further understand the mechanism and organization of life activities. The clustering algorithms used to analyze t...

    Authors: Zihao Zhao, Wenjun Xu, Aiwen Chen, Yueyue Han, Shengrong Xia, ChuLei Xiang, Chao Wang, Jun Jiao, Hui Wang, Xiaohui Yuan and Lichuan Gu
    Citation: BMC Genomics 2021 22:423
    Content type: Research Published on:

  27. Canola (Brassica napus L.) is one of the most important oil-producing crops in China and worldwide. The yield and quality of canola is frequently threatened by environmental stresses including drought, cold and h...

    Authors: Hanfeng Zhang, Wu-Zhen Liu, Yupeng Zhang, Min Deng, Fangfang Niu, Bo Yang, Xiaoling Wang, Boya Wang, Wanwan Liang, Michael K Deyholos and Yuan-Qing Jiang
    Citation: BMC Genomics 2014 15:211
    Content type: Research article Published on:

  28. Hepatitis C virus (HCV) is a major cause of chronic liver disease by infecting over 170 million people worldwide. Recent studies have shown that microRNAs (miRNAs), a class of small non-coding regulatory RNAs,...

    Authors: Xinxia Peng, Yu Li, Kathie-Anne Walters, Elizabeth R Rosenzweig, Sharon L Lederer, Lauri D Aicher, Sean Proll and Michael G Katze
    Citation: BMC Genomics 2009 10:373
    Content type: Research article Published on:

  29. The mature mouse oocyte contains the full complement of maternal proteins required for fertilization, reprogramming, zygotic gene activation (ZGA), and the early stages of embryogenesis. However, due to limita...

    Authors: Ping Zhang, Xiaojian Ni, Ying Guo, Xuejiang Guo, Yufeng Wang, Zuomin Zhou, Ran Huo and Jiahao Sha
    Citation: BMC Genomics 2009 10:348
    Content type: Research article Published on:

  30. RNA-Seq analysis of Formalin-Fixed and Paraffin-Embedded (FFPE) samples has emerged as a highly effective approach and is increasingly being used in clinical research and drug development. However, the process...

    Authors: Liang Zong, Yabing Zhu, Yuan Jiang, Ying Xia, Qun Liu and Sanjie Jiang
    Citation: BMC Genomics 2023 24:777
    Content type: Research Published on:

  31. Cytokinins (CKs) have significant roles in various aspects of plant growth and development, and they are also involved in plant stress adaptations. The fine-tuning of the controlled CK levels in individual tis...

    Authors: Zhenning Liu, Yanxia Lv, Mei Zhang, Yapei Liu, Lijun Kong, Minghua Zou, Gang Lu, Jiashu Cao and Xiaolin Yu
    Citation: BMC Genomics 2013 14:594
    Content type: Research article Published on:

  32. The low-shear microgravity environment, modeled by rotating suspension culture bioreactors called high aspect ratio vessels (HARVs), allows investigation in ground-based studies of the effects of microgravity ...

    Authors: Kathy B Sheehan, Kate McInnerney, Boloroo Purevdorj-Gage, Sara D Altenburg and Linda E Hyman
    Citation: BMC Genomics 2007 8:3
    Content type: Research article Published on:

  33. Myopia is one of the most common vision defects worldwide. microRNAs can regulate the target gene expression, influencing the development of diseases.

    Authors: Dadong Guo, Meihua Ding, Xiaoli Song, Yuanyuan Sun, Guoping Li, Zonghong Li, Huixia Wei, Jianfeng Wu, Wenjun Jiang and Hongsheng Bi
    Citation: BMC Genomics 2020 21:13
    Content type: Research article Published on:

  34. The epidermal growth factor receptor (EGFR/HER1) and its downstream signaling events are important for regulating cell growth and behavior in many epithelial tumors types. In breast cancer, the role of EGFR is...

    Authors: Katherine A Hoadley, Victor J Weigman, Cheng Fan, Lynda R Sawyer, Xiaping He, Melissa A Troester, Carolyn I Sartor, Thais Rieger-House, Philip S Bernard, Lisa A Carey and Charles M Perou
    Citation: BMC Genomics 2007 8:258
    Content type: Research article Published on:

  35. Tall fescue (Festuca arundinacea Schreb.) is major cool-season forage and turf grass species worldwide, but high-temperature is a major environmental stress that dramatically threaten forage production and turf m...

    Authors: Tao Hu, Xiaoyan Sun, Xunzhong Zhang, Eviatar Nevo and Jinmin Fu
    Citation: BMC Genomics 2014 15:1147
    Content type: Research article Published on:

  36. Low phytic acid (lpa) crops are potentially eco-friendly alternative to conventional normal phytic acid (PA) crops, improving mineral bioavailability in monogastric animals as well as decreasing phosphate polluti...

    Authors: Neelam R. Redekar, Ruslan M. Biyashev, Roderick V. Jensen, Richard F. Helm, Elizabeth A. Grabau and M. A. Saghai Maroof
    Citation: BMC Genomics 2015 16:1074
    Content type: Research article Published on:

  37. Nilaparvata lugens (the brown planthopper, BPH) and Laodelphax striatellus (the small brown planthopper, SBPH) are two of the most important pests of rice. Up to now, there was only one mitochondrial genome of ri...

    Authors: Kai-Jun Zhang, Wen-Chao Zhu, Xia Rong, Yan-Kai Zhang, Xiu-Lei Ding, Jing Liu, Da-Song Chen, Yu Du and Xiao-Yue Hong
    Citation: BMC Genomics 2013 14:417
    Content type: Research article Published on:

  38. Lycoris aurea is a medicine-valuable and ornamental herb widely distributed in China. Former studied have showed that methyl jasmonate (MJ) treatment could increase the content of glan...

    Authors: Sheng Xu, Yumei Jiang, Ning Wang, Bing Xia, Yilong Jiang, Xiaodan Li, Zhengzhi Zhang, Yikui Li and Ren Wang
    Citation: BMC Genomics 2016 17:789
    Content type: Research article Published on:

  39. The elastin gene (ELN) is implicated as a factor in both supravalvular aortic stenosis (SVAS) and Williams Beuren Syndrome (WBS), two diseases involving pronounced complications in mental or physical developme...

    Authors: Helen Piontkivska, Yi Zhang, Eric D Green and Laura Elnitski
    Citation: BMC Genomics 2004 5:31
    Content type: Research article Published on:

  40. Clinical and subclinical endometritis are known to affect the fertility of dairy cows by inducing uterine inflammation. We hypothesized that clinical or subclinical endometritis could affect the fertility of c...

    Authors: Dessie Salilew-Wondim, Sally Ibrahim, Samuel Gebremedhn, Dawit Tesfaye, Maike Heppelmann, Heinrich Bollwein, Christiane Pfarrer, Ernst Tholen, Christiane Neuhoff, Karl Schellander and Michael Hoelker
    Citation: BMC Genomics 2016 17:218
    Content type: Research article Published on:

  41. The regulation of endometrial inflammation has important consequences for the resumption of bovine fertility postpartum. All cows experience bacterial influx into the uterus after calving; however a significan...

    Authors: Cathriona Foley, Aspinas Chapwanya, John J. Callanan, Ronan Whiston, Raúl Miranda-CasoLuengo, Junnan Lu, Wim G. Meijer, David J. Lynn, Cliona O’ Farrelly and Kieran G. Meade
    Citation: BMC Genomics 2015 16:811
    Content type: Research article Published on:

    The Erratum to this article has been published in BMC Genomics 2015 16:1050

  44. Macrobrachium amazonicum is a freshwater prawn widely distributed in South America that is undergoing speciation, so the denomination “M. amazonicum complex” is used for it. The mitochondrial cytochrome c oxidase...

    Authors: Jerônimo Costa Marques-Neto, Gabriel Monteiro de Lima, Carlos Murilo Tenório Maciel, Bruna Ramalho Maciel, Fernando Araujo Abrunhosa, Iracilda Sampaio and Cristiana Ramalho Maciel
    Citation: BMC Genomics 2023 24:677
    Content type: Research Published on:

  45. Subtelomeric RIFIN genes constitute the most abundant multigene family in Plasmodium falciparum. RIFIN products are targets for the human immune response and contribute to the antigenic variability of the parasit...

    Authors: Emanuele Bultrini, Kevin Brick, Srayanta Mukherjee, Yang Zhang, Francesco Silvestrini, Pietro Alano and Elisabetta Pizzi
    Citation: BMC Genomics 2009 10:445
    Content type: Research article Published on:

  46. Alternative splicing provides a major mechanism to generate protein diversity. Increasing evidence suggests a link of dysregulation of splicing associated with cancer. While previous genomic-based studies demo...

    Authors: Wei Zhao, Katherine A. Hoadley, Joel S. Parker and Charles M. Perou
    Citation: BMC Genomics 2016 17:181
    Content type: Research article Published on:

  47. Malaria parasites of the genus Plasmodium possess large hyper-variable families of antigen-encoding genes. These are often variantly-expressed and are major virulence factors for immune evasion and the maintenanc...

    Authors: Adam Stanton, Lynne M. Harris, Gemma Graham and Catherine J. Merrick
    Citation: BMC Genomics 2016 17:859
    Content type: Research Article Published on:

  48. Methods for gene-class testing, such as Gene Set Enrichment Analysis (GSEA), incorporate biological knowledge into the analysis and interpretation of microarray data by comparing gene expression patterns to pa...

    Authors: Michael A Thomas, Luobin Yang, Barbara J Carter and Rebecca D Klaper
    Citation: BMC Genomics 2011 12:66
    Content type: Research article Published on:

  49. Yeast infections are often connected with formation of biofilms that are extremely difficult to eradicate. An excellent model system for deciphering multifactorial determinants of yeast biofilm development is ...

    Authors: Jana Maršíková, Derek Wilkinson, Otakar Hlaváček, Gregor D. Gilfillan, Alexandru Mizeranschi, Timothy Hughes, Markéta Begany, Stanislava Rešetárová, Libuše Váchová and Zdena Palková
    Citation: BMC Genomics 2017 18:814
    Content type: Research article Published on:

  50. The potato cyst nematode Globodera pallida has biotrophic interactions with its host. The nematode induces a feeding structure – the syncytium – which it keeps alive for the duration of the life cycle and on whic...

    Authors: Peter Thorpe, Sophie Mantelin, Peter JA Cock, Vivian C Blok, Mirela C Coke, Sebastian Eves-van den Akker, Elena Guzeeva, Catherine J Lilley, Geert Smant, Adam J Reid, Kathryn M Wright, Peter E Urwin and John T Jones
    Citation: BMC Genomics 2014 15:923
    Content type: Research article Published on:

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