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  1. Alfalfa (Medicago sativa) is the most widely planted legume forage and one of the most economically valuable crops in the world. The periodic changes in its growth and development and abiotic stress determine its...

    Authors: Fenqi Chen, Jinqing Zhang, Xue Ha and Huiling Ma
    Citation: BMC Genomics 2023 24:498
    Content type: Research Published on:

  2. Growing evidence has shown that gut microbiome composition is associated with breast cancer (BC), but the causality remains unknown. We aimed to investigate the link between BC prognosis and the gut microbiome...

    Authors: Weimin Hong, Guoxin Huang, Danhong Wang, Yadan Xu, Jie Qiu, Bin Pei, Da Qian and Xuli Meng
    Citation: BMC Genomics 2023 24:497
    Content type: Research Published on:

  3. Despite recent efforts to increase diversity in genome-wide association studies (GWASs), most loci currently associated with kidney function are still limited to European ancestry due to the underlying sample ...

    Authors: Christopher Kintu, Opeyemi Soremekun, Tafadzwa Machipisa, Richard Mayanja, Robert Kalyesubula, Bernard S. Bagaya, Daudi Jjingo, Tinashe Chikowore and Segun Fatumo
    Citation: BMC Genomics 2023 24:496
    Content type: Research Published on:

  4. Peanut (Arachis hypogaea L.) is an important oilseed crop worldwide. Improving its yield is crucial for sustainable peanut production to meet increasing food and industrial requirements. Deciphering the genetic c...

    Authors: Yuanjin Fang, Hua Liu, Li Qin, Feiyan Qi, Ziqi Sun, Jihua Wu, Wenzhao Dong, Bingyan Huang and Xinyou Zhang
    Citation: BMC Genomics 2023 24:495
    Content type: Research Published on:

  5. Soybean is one of the most important oil crops in the world. The domestication of wild soybean has resulted in significant changes in the seed oil content and seed size of cultivated soybeans. To better unders...

    Authors: Yanjie Yao, Erhui Xiong, Xuelian Qu, Junfeng Li, Hongli Liu, Leipo Quan, Wenyan Lu, Xuling Zhu, Meiling Chen, Ke Li, Xiaoming Chen, Yun Lian, Weiguo Lu, Dan Zhang, Xinan Zhou, Shanshan Chu…
    Citation: BMC Genomics 2023 24:494
    Content type: Research Published on:

  6. Chromatin-associated phase separation proteins establish various biomolecular condensates via liquid–liquid phase separation (LLPS), which regulates vital biological processes spatially and temporally. However...

    Authors: Peiyu Zhu, Chao Hou, Manlin Liu, Taoyu Chen, Tingting Li and Likun Wang
    Citation: BMC Genomics 2023 24:493
    Content type: Research Published on:

  7. Immune traits are considered to serve as potential biomarkers for pig’s health. Medium to high heritabilities have been observed for some of the immune traits suggesting genetic variability of these phenotypes...

    Authors: Katharina Roth, Maren Julia Pröll-Cornelissen, Hubert Henne, Anne Kathrin Appel, Karl Schellander, Ernst Tholen and Christine Große-Brinkhaus
    Citation: BMC Genomics 2023 24:492
    Content type: Research Published on:

  8. DNA methylation plays an important role in life processes by affecting gene expression, but it is still unclear how DNA methylation is controlled and how it regulates gene transcription under high temperature ...

    Authors: Anzheng Liu, Fanshuang Zeng, Luo Wang, Hao Zhen, Xinglong Xia, Honglin Pei, Changkun Dong, Yanmin Zhang and Jun Ding
    Citation: BMC Genomics 2023 24:491
    Content type: Research Published on:

  9. As the characteristic functional component in ginger, gingerols possess several health-promoting properties. Long non-coding RNAs (lncRNAs) act as crucial regulators of diverse biological processes. However, l...

    Authors: Wenlin Zhang, Yang Yang, Xuedong Zhu, Suyu Yang, Ximei Liao, Honglei Li, Zhexin Li, Qinhong Liao, Jianmin Tang, Guohua Zhao and Lin Wu
    Citation: BMC Genomics 2023 24:490
    Content type: Research Published on:

  11. WD40 transcription factors (TFs) constitute a large gene family in eukaryotes, playing diverse roles in cellular processes. However, their functions in the major ornamental plant, Rhododendron simsii, remain poor...

    Authors: Cheng Wang, Yafang Tang, Yan Li, Chao Hu, Jingyi Li and Ang Lyu
    Citation: BMC Genomics 2023 24:488
    Content type: Research Published on:

  12. Telomerase reverse transcriptase (TERT) plays a crucial role in synthesizing telomeric repeats that safeguard chromosomes from damage and fusion, thereby maintaining genome stability. Mutations in the TERT gene c...

    Authors: Mykyta Peka, Viktor Balatsky, Artem Saienko and Oleksandr Tsereniuk
    Citation: BMC Genomics 2023 24:487
    Content type: Research Published on:

  13. The nematode Caenorhabditis briggsae has been used as a model in comparative genomics studies with Caenorhabditis elegans because of their striking morphological and behavioral similarities. However, the potentia...

    Authors: Nicolas D. Moya, Lewis Stevens, Isabella R. Miller, Chloe E. Sokol, Joseph L. Galindo, Alexandra D. Bardas, Edward S. H. Koh, Justine Rozenich, Cassia Yeo, Maryanne Xu and Erik C. Andersen
    Citation: BMC Genomics 2023 24:486
    Content type: Research Published on:

  14. Nutrition has not only an impact on the general wellbeing of an animal but can also affect reproductive processes. In cattle, feeding regimes can influence the age of puberty onset and alter gonadal developmen...

    Authors: Volker Röttgen, Lisa-Maria Tümmler, Dirk Koczan, Alexander Rebl, Björn Kuhla, Jens Vanselow and Anja Baufeld
    Citation: BMC Genomics 2023 24:485
    Content type: Research Published on:

  15. Sepsis is a high mortality disease which seriously threatens human life and health, for which the pathogenetic mechanism still unclear. There is increasing evidence showed that immune and inflammation response...

    Authors: Tianfeng Wang, Si Xu, Lei Zhang, Tianjun Yang, Xiaoqin Fan, Chunyan Zhu, Yinzhong Wang, Fei Tong, Qing Mei and Aijun Pan
    Citation: BMC Genomics 2023 24:484
    Content type: Research Published on:

  16. Babesia caballi is an intraerythrocytic parasite from the phylum Apicomplexa, capable of infecting equids and causing equine piroplasmosis. However, since there is limited genome information available on B. cabal...

    Authors: Akihiro Ochi, Taishi Kidaka, Hassan Hakimi, Masahito Asada and Junya Yamagishi
    Citation: BMC Genomics 2023 24:483
    Content type: Research Published on:

  17. The natural products, metabolites, of gut microbes are crucial effect factors on diseases. Comprehensive identification and annotation of relationships among disease, metabolites, and microbes can provide effi...

    Authors: Cheng-Yu Wang, Xia Kuang, Qiao-Qiao Wang, Gu-Qin Zhang, Zhen-Shun Cheng, Zi-Xin Deng and Feng-Biao Guo
    Citation: BMC Genomics 2023 24:482
    Content type: Database Published on:

  18. Wulong geese (Anser cygnoides orientalis) are known for their excellent egg-laying performance. However, they show considerable population differences in egg-laying behavior. This study combined genome-wide selec...

    Authors: Jingjing Liu, Yu Xiao, Pengwei Ren, Shuer Zhang, Yang Liu and Mingxia Zhu
    Citation: BMC Genomics 2023 24:481
    Content type: Research Published on:

  19. Reproduction is a key feature of the sustainability of a species and thus represents an important component in livestock genetic improvement programs. Most reproductive traits are lowly heritable. In order to ...

    Authors: Jason J Reding, Robert R van der Westhuizen, Donagh P Berry and Este van Marle-Köster
    Citation: BMC Genomics 2023 24:480
    Content type: Research Published on:

  21. Heat shock protein 20 (HSP20) is a member of the heat stress-related protein family, which plays critical roles in plant growth, development, and response to abiotic stresses. Although many HSP20 genes have been ...

    Authors: Yangguang Hua, Qiao Liu, Yufeng Zhai, Limin Zhao, Jinjian Zhu, Xiaodan Zhang, Qiaojun Jia, Zongsuo Liang and Dekai Wang
    Citation: BMC Genomics 2023 24:478
    Content type: Research Published on:

  22. Numerous circular RNAs (circRNAs) have been recently identified in porcine tissues and cell types. Nevertheless, their significance in porcine spleen development is yet unelucidated. Herein, we reported an ext...

    Authors: Yifu Wang, Jinhua Cheng, Chao Xu, Jian Jin, Wenbin Bao, Shenglong Wu and Zhengchang Wu
    Citation: BMC Genomics 2023 24:477
    Content type: Research Published on:

  23. Tilapia is one of the most essential farmed fishes in the world. It is a tropical and subtropical freshwater fish well adapted to warm water but sensitive to cold weather. Extreme cold weather could cause seve...

    Authors: Abdel-Fattah M. El-Sayed, Asmaa A. Khaled, Amira M. Hamdan, Sara O. Makled, Elsayed E. Hafez and Ahmed A. Saleh
    Citation: BMC Genomics 2023 24:476
    Content type: Research Published on:

  24. The genus Sophora (Fabaceae) includes medicinal plants that have been used in East Asian countries since antiquity. Sophora flavescens is a perennial herb indigenous to China, India, Japan, Korea, and Russia. Its...

    Authors: Yang Jae Kang, Halim Park, Yejin Lee, Sanghwa Yoon and Myounghai Kwak
    Citation: BMC Genomics 2023 24:475
    Content type: Research Published on:

  25. The glyoxalase system includes glyoxalase I (GLXI), glyoxalase II (GLXII) and glyoxalase III (GLXIII), which are responsible for methylglyoxal (MG) detoxification and involved in abiotic stress responses such ...

    Authors: Menglin Xu, Dongyun Zuo, Qiaolian Wang, Limin Lv, Youping Zhang, Huixin Jiao, Xiang Zhang, Yi Yang, Guoli Song and Hailiang Cheng
    Citation: BMC Genomics 2023 24:474
    Content type: Research Published on:

  26. Drought stress is a prevalent abiotic stress that significantly hinders the growth and development of plants. According to studies, β-aminobutyric acid (BABA) can influence the ABA pathway through the AtIBI1 rece...

    Authors: Cong-Hua Feng, Meng-Xue Niu, Shilei Zhao, Shangjing Guo, Weilun Yin, Xinli Xia and Yanyan Su
    Citation: BMC Genomics 2023 24:473
    Content type: Research Published on:

  27. The nutritional status during early life can have enduring effects on an animal’s metabolism, although the mechanisms underlying these long-term effects are still unclear. Epigenetic modifications are consider...

    Authors: Yusuke Inoue, Yuta Suzuki, Yoshimi Kunishima, Terumi Washio, Shinichi Morishita and Hiroyuki Takeda
    Citation: BMC Genomics 2023 24:472
    Content type: Research Published on:

  28. Protists of the family Trypanosomatidae (phylum Euglenozoa) have gained notoriety as parasites affecting humans, domestic animals, and agricultural plants. However, the true extent of the group's diversity spr...

    Authors: Amanda T. S. Albanaz, Mark Carrington, Alexander O. Frolov, Anna I. Ganyukova, Evgeny S. Gerasimov, Alexei Y. Kostygov, Julius Lukeš, Marina N. Malysheva, Jan Votýpka, Alexandra Zakharova, Kristína Záhonová, Sara L. Zimmer, Vyacheslav Yurchenko and Anzhelika Butenko
    Citation: BMC Genomics 2023 24:471
    Content type: Research Published on:

  29. Alpaca (Vicugna pacos), llama (Lama glama), vicugna (Vicugna vicugna) and guanaco (Lama guanicoe), are the camelid species distributed over the Andean high-altitude grasslands, the Altiplano, and the Patagonian a...

    Authors: Stefano Pallotti, Matteo Picciolini, Marco Antonini, Carlo Renieri and Valerio Napolioni
    Citation: BMC Genomics 2023 24:470
    Content type: Research Published on:

  30. All cancers harbor somatic mutations in their genomes. In principle, mutations affecting between one and fifty base pairs are generally classified as small mutational events. Conversely, large mutational event...

    Authors: Azhar Khandekar, Raviteja Vangara, Mark Barnes, Marcos Díaz-Gay, Ammal Abbasi, Erik N. Bergstrom, Christopher D. Steele, Nischalan Pillay and Ludmil B. Alexandrov
    Citation: BMC Genomics 2023 24:469
    Content type: Software Published on:

  32. Phloem protein 2 (PP2) proteins play a vital role in the Phloem-based defense (PBD) and participate in many abiotic and biotic stress. However, research on PP2 proteins in cotton is still lacking.

    Authors: Fei Wei, Pengyun Chen, Hongliang Jian, Xiaohao Guo, Xiaoyan Lv, Boying Lian, Mengxi Sun, Li An, Xinyu Dang, Miaoqian Yang, Hongmei Wu, Nan Zhang, Aimin Wu, Hantao Wang, Liang Ma, Xiaokang Fu…
    Citation: BMC Genomics 2023 24:467
    Content type: Research Published on:

  33. Plants possess mitochondrial genomes that are large and complex compared to animals. Despite their size, plant mitochondrial genomes do not contain significantly more genes than their animal counterparts. Stud...

    Authors: Jiaxing Li, Yinglong Chen, Yaling Liu, Chen Wang, Ling Li and Yuehui Chao
    Citation: BMC Genomics 2023 24:466
    Content type: Research Published on:

  34. Isatis tinctoria Linnaeus and Isatis indigotica Fortune are very inconsistent in their morphological characteristics, but the Flora of China treats them as the same species. In this work, a new technology that di...

    Authors: Yong Su, Man Zhang, Qiaosheng Guo, Min Wei, Hongzhuan Shi, Tao Wang, Zhengzhou Han, Huihui Liu, Chang Liu and Jianmin Huang
    Citation: BMC Genomics 2023 24:465
    Content type: Research Published on:

  35. Folic acid is a water-soluble B vitamin (B9), which is closely related to the body’s immune and other metabolic pathways. The folic acid synthesized by rumen microbes has been unable to meet the needs of high-...

    Authors: Xueqin Liu, Siyuan Mi, Wenlong Li, Jinning Zhang, Serafino M. A. Augustino, Zhichao Zhang, Ruiqiang Zhang, Wei Xiao and Ying Yu
    Citation: BMC Genomics 2023 24:464
    Content type: Research Published on:

  36. In breast cancer, as in all cancers, genetic and epigenetic deregulations can result in out-of-context expressions of a set of normally silent tissue-specific genes. The activation of some of these genes in va...

    Authors: Emmanuelle Jacquet, Florent Chuffart, Anne-Laure Vitte, Eleni Nika, Mireille Mousseau, Saadi Khochbin, Sophie Rousseaux and Ekaterina Bourova-Flin
    Citation: BMC Genomics 2023 24:463
    Content type: Research Published on:

  37. Numerous studies in the past have expanded our understanding of the genetic differences of global distributed cyanobacteria that originated around billions of years ago, however, unraveling how gene gain and l...

    Authors: Xian Zhang, Lijun Xiao, Jiahui Liu, Qibai Tian and Jiaqi Xie
    Citation: BMC Genomics 2023 24:462
    Content type: Research Published on:

  39. Approximately 4–8% of the world suffers from a rare disease. Rare diseases are often difficult to diagnose, and many do not have approved therapies. Genetic sequencing has the potential to shorten the current ...

    Authors: Erica L. Lyons, Daniel Watson, Mohammad S. Alodadi, Sharie J. Haugabook, Gregory J. Tawa, Fady Hannah-Shmouni, Forbes D. Porter, Jack R. Collins, Elizabeth A. Ottinger and Uma S. Mudunuri
    Citation: BMC Genomics 2023 24:460
    Content type: Research Published on:

  40. Acute heat stress could induce high mortality and cause huge economic losses in the poultry industry. Although many studies have revealed heat stress-induced injuries of multiple tissues, the main target tissu...

    Authors: Jiuhong Nan, Hongrui Yang, Li Rong, Zijia Jia, Sendong Yang and Shijun Li
    Citation: BMC Genomics 2023 24:459
    Content type: Research Published on:

  41. Hull colour is an important morphological marker for selection in seed production of foxtail millet. However, the molecular mechanisms underlying hull colour variation remain unknown.

    Authors: Shuqing Guo, Shaohua Chai, Yan Guo, Xing Shi, Fei Han, Ting Qu, Lu Xing, Qinghua Yang, Jinfeng Gao, Xiaoli Gao, Baili Feng, Hui Song and Pu Yang
    Citation: BMC Genomics 2023 24:458
    Content type: Research Published on:

  43. Lifespan extension has independently evolved several times during mammalian evolution, leading to the emergence of a group of long-lived animals. Though mammalian/mechanistic target of rapamycin (mTOR) signali...

    Authors: Fei Yang, Xing Liu, Yi Li, Zhenpeng Yu, Xin Huang, Guang Yang and Shixia Xu
    Citation: BMC Genomics 2023 24:456
    Content type: Research Published on:

  44. The 1RS arm of wheat-rye 1BL.1RS translocations contains several subtelomeric tandem repeat families. To study the effect of the difference in the composition of these tandem repeats on the meiotic recombinati...

    Authors: Ziying Xiong, Jie Luo, Yang Zou, Qilin Tang, Shulan Fu and Zongxiang Tang
    Citation: BMC Genomics 2023 24:455
    Content type: Research Published on:

  45. Trichoderma is a diverse genus of fungi that includes several species that possess biotechnological and agricultural applications, including the biocontrol of pathogenic fungi and nematodes. The mitochondrial gen...

    Authors: Zachary Gorman, Jianchi Chen, Adalberto A. Perez de Leon and Christopher Michael Wallis
    Citation: BMC Genomics 2023 24:454
    Content type: Research Published on:

  46. The Pacific oyster, Crassostrea gigas, is an economically important shellfish around the world. Great efforts have been made to improve its growth rate through genetic breeding. However, the candidate marker gene...

    Authors: Yongjing Li, Ben Yang, Chenyu Shi, Ying Tan, Liting Ren, Ahmed Mokrani, Qi Li and Shikai Liu
    Citation: BMC Genomics 2023 24:453
    Content type: Research Published on:

  49. Rheumatoid arthritis (RA) is often accompanied by a common extra-articular manifestation known as RA-related usual interstitial pneumonia (RA-UIP), which is associated with a poor prognosis. However, the mecha...

    Authors: Yulu Qiu, Chang Liu, Yumeng Shi, Nannan Hao, Wenfeng Tan and Fang Wang
    Citation: BMC Genomics 2023 24:450
    Content type: Research Published on:

  50. For Asian seabass (Lates calcarifer, Bloch 1790) cultured at sea cages various aquatic pathogens, complex environmental and stress factors are considered as leading causes of disease, causing tens of millions of ...

    Authors: Xueyan Shen, Yong Chao Niu, Joseph Angelo V. Uichanco, Norman Phua, Pranjali Bhandare, Natascha May Thevasagayam, Sai Rama Sridatta Prakki and László Orbán
    Citation: BMC Genomics 2023 24:449
    Content type: Research Published on:

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BMC Genomics

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