Skip to main content

Articles

6358 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 40 of 128

  1. Domestic animal breeding and product quality improvement require the control of reproduction, nutrition, health and welfare in these animals. It is thus necessary to improve our knowledge of the major physiolo...

    Authors: Agnès Bonnet, Eddie Iannuccelli, Karine Hugot, Francis Benne, Maria F Bonaldo, Marcelo B Soares, François Hatey and Gwenola Tosser-Klopp
    Citation: BMC Genomics 2008 9:17
    Content type: Research article Published on:

  2. Bovine milk is an important nutrient source for humans. Forage plays a vital role in dairy husbandry via affecting milk quality and quantity. However, the differences in mammary metabolism of dairy cows fed di...

    Authors: Wenting Dai, Quanjuan Wang, Fengqi Zhao, Jianxin Liu and Hongyun Liu
    Citation: BMC Genomics 2018 19:403
    Content type: Research article Published on:

  3. Valine-glutamine (VQ) motif containing proteins play important roles in abiotic and biotic stress responses in plants. However, little is known about the origin and evolution as well as comprehensive expressio...

    Authors: Shu-Ye Jiang, Mayalagu Sevugan and Srinivasan Ramachandran
    Citation: BMC Genomics 2018 19:342
    Content type: Research article Published on:

  5. In oviparous vertebrates, including fish, vitellogenesis consists of highly regulated pathways involving 17β-estradiol (E2). Previous studies focused on a relatively small number of hepatic expressed genes dur...

    Authors: Liraz Levi, Irena Pekarski, Ellen Gutman, Paolo Fortina, Terry Hyslop, Jakob Biran, Berta Levavi-Sivan and Esther Lubzens
    Citation: BMC Genomics 2009 10:141
    Content type: Research article Published on:

  6. Many temperate insects survive the harsh conditions of winter by undergoing photoperiodic diapause, a pre-programmed developmental arrest initiated by short day lengths. Despite the well-established ecological...

    Authors: Monica F Poelchau, Julie A Reynolds, David L Denlinger, Christine G Elsik and Peter A Armbruster
    Citation: BMC Genomics 2011 12:619
    Content type: Research article Published on:

  7. Most plant-pathogenic Xanthomonas bacteria harbor transcription activator-like effector (TALE) genes, which function as transcriptional activators of host plant genes and support infection. The entire repertoire ...

    Authors: Annett Erkes, René P. Grove, Milena Žarković, Sebastian Krautwurst, Ralf Koebnik, Richard D. Morgan, Geoffrey G. Wilson, Martin Hölzer, Manja Marz, Jens Boch and Jan Grau
    Citation: BMC Genomics 2023 24:151
    Content type: Research Published on:

  8. Marine endophytic fungi (MEF) are good sources of structurally unique and biologically active secondary metabolites. Due to the increase in antimicrobial resistance, the secondary metabolites from MEF ought to...

    Authors: Ethel Juliet Blessie, Wasco Wruck, Benaiah Annertey Abbey, Audrey Ncube, Nina Graffmann, Vincent Amarh, Patrick Kobina Arthur and James Adjaye
    Citation: BMC Genomics 2020 21:265
    Content type: Research article Published on:

  9. Sporisorium scitamineum causes the sugarcane smut disease, one of the most serious constraints to global sugarcane production. S. scitamineum possesses a sexual mating system composed ...

    Authors: Meixin Yan, Weijun Dai, Enping Cai, Yi Zhen Deng, Changqing Chang, Zide Jiang and Lian-Hui Zhang
    Citation: BMC Genomics 2016 17:354
    Content type: Research article Published on:

  10. Venoms have evolved independently over a hundred times in the animal kingdom to deter predators and/or subdue prey. Venoms are cocktails of various secreted toxins, whose origin and diversification provide an ...

    Authors: Axel Touchard, Valentine Barassé, Jean-Michel Malgouyre, Michel Treilhou, Christophe Klopp and Elsa Bonnafé
    Citation: BMC Genomics 2024 25:84
    Content type: Research Published on:

  12. Somatic mutations drive colorectal cancer (CRC) by disrupting gene regulatory mechanisms. Distinct combinations of mutations can result in unique changes to regulatory mechanisms leading to variability in the ...

    Authors: Jonathan W. Villanueva, Lawrence Kwong, Teng Han, Salvador Alonso Martinez, Michael T. Shanahan, Matt Kanke, Lukas E. Dow, Charles G. Danko and Praveen Sethupathy
    Citation: BMC Genomics 2022 23:792
    Content type: Research Published on:

  13. Abiotic stress, including low temperature, limits the productivity and geographical distribution of plants, which has led to significant interest in understanding the complex processes that allow plants to ada...

    Authors: Stephen J Robinson and Isobel AP Parkin
    Citation: BMC Genomics 2008 9:434
    Content type: Research article Published on:

  14. Clostridium beijerinckii is a prominent solvent-producing microbe that has great potential for biofuel and chemical industries. Although transcriptional analysis is essential to understand gene functions and regu...

    Authors: Yi Wang, Xiangzhen Li, Yuejian Mao and Hans P Blaschek
    Citation: BMC Genomics 2012 13:102
    Content type: Research article Published on:

  16. Regulation of gene expression in Plasmodium falciparum (Pf) remains poorly understood. While over half the genes are estimated to be regulated at the transcriptional level, few regulatory motifs and transcription...

    Authors: Prathima Iengar and NV Joshi
    Citation: BMC Genomics 2009 10:18
    Content type: Research article Published on:

  17. Scale insects are worldwide sap-sucking parasites, which can be distinguished into neococcoids and non-neococcoids. Neococcoids are monophyletic with a peculiar reproductive system, paternal genome elimination...

    Authors: Xue-Fei Tang, Yu-Hao Huang, Yi-Fei Sun, Pei-Fang Zhang, Li-Zhi Huo, Hao-Sen Li and Hong Pang
    Citation: BMC Genomics 2023 24:231
    Content type: Research Published on:

  18. Jasmonate (JA) is the important phytohormone to regulate plant growth and adaption to stress signals. MYC2, an bHLH transcription factor, is the master regulator of JA signaling. Although MYC2 in maize has bee...

    Authors: Lijun Liu, Yuhan Zhang, Chen Tang, Jine Wu, Jingye Fu and Qiang Wang
    Citation: BMC Genomics 2024 25:397
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2024 25:491

  19. Despite being one of the primary mechanisms of gene expression regulation in eukaryotes, alternative splicing is often overlooked in ecotoxicogenomic studies. The process of alternative splicing facilitates th...

    Authors: Sneha Suresh, Teresa J. Crease, Melania E. Cristescu and Frédéric J. J. Chain
    Citation: BMC Genomics 2020 21:433
    Content type: Research article Published on:

  20. Prion diseases are fatal neurodegenerative disorders whose pathogenesis mechanisms are not fully understood. In this context, the analysis of gene expression alterations occurring in prion-infected animals rep...

    Authors: Maura Barbisin, Silvia Vanni, Ann-Christin Schmädicke, Judith Montag, Dirk Motzkus, Lennart Opitz, Gabriela Salinas-Riester and Giuseppe Legname
    Citation: BMC Genomics 2014 15:434
    Content type: Research article Published on:

  21. Wheat embryo and endosperm play important roles in seed germination, seedling survival, and subsequent vegetative growth. ABA can positively regulate dormancy induction and negatively regulates seed germinatio...

    Authors: Yonglong Yu, Shoumin Zhen, Shu Wang, Yaping Wang, Hui Cao, Yanzhen Zhang, Jiarui Li and Yueming Yan
    Citation: BMC Genomics 2016 17:97
    Content type: Research article Published on:

  22. Tibial dyschondroplasia (TD) is a bone disorder in which dead chondrocytes accumulate as a result of apoptosis and non-vascularization in the tibial bone of broiler chickens. The pathogenicity of TD is under e...

    Authors: Ali Raza Jahejo, Sayyad Ali Raza Bukhari, Nasir Rajput, Nazeer Hussain Kalhoro, Imdad Hussain Leghari, Sayed Haidar Abbas Raza, Zhen Li, Wen-zhong Liu and Wen-xia Tian
    Citation: BMC Genomics 2022 23:323
    Content type: Research Published on:

  24. Echinacea spp. extracts and the derived phytocompounds have been shown to induce specific immune cell activities and are popularly used as food supplements or nutraceuticals for immuno-modulatory functions. Dendr...

    Authors: Chien-Yu Wang, Vanisree Staniforth, Ming-Tsang Chiao, Chia-Chung Hou, Han-Ming Wu, Kuo-Chen Yeh, Chun-Houh Chen, Pei-Ing Hwang, Tuan-Nan Wen, Lie-Fen Shyur and Ning-Sun Yang
    Citation: BMC Genomics 2008 9:479
    Content type: Research article Published on:

  25. Both large deletions in genome and heat shock stress would lead to alterations in the gene expression profile; however, whether there is any potential linkage between these disturbances to the transcriptome ha...

    Authors: Bei-Wen Ying, Shigeto Seno, Fuyuro Kaneko, Hideo Matsuda and Tetsuya Yomo
    Citation: BMC Genomics 2013 14:25
    Content type: Research article Published on:

  26. As the critical tissue of the central nervous system, the brain has been found to be involved in gonad development. Previous studies have suggested that gonadal fate may be affected by the brain. Identifying b...

    Authors: Xufang Shen, Hongwei Yan, Jieming Jiang, Weiyuan Li, Yuyu Xiong, Qi Liu and Ying Liu
    Citation: BMC Genomics 2021 22:851
    Content type: Research Published on:

  27. Chromosome ends are composed of telomeric repeats and subtelomeric regions, which are patchworks of genes interspersed with repeated elements. Although chromosome ends display similar arrangements in different...

    Authors: María C Dalmasso, Santiago J Carmona, Sergio O Angel and Fernán Agüero
    Citation: BMC Genomics 2014 15:21
    Content type: Research article Published on:

  28. Fusarium head blight (FHB) resistance in the durum wheat breeding gene pool is rarely reported. Triticum turgidum ssp. carthlicum line Blackbird is a tetraploid relative of durum wheat that offers partial FHB res...

    Authors: Ehsan Sari, Adrian L. Cabral, Brittany Polley, Yifang Tan, Emma Hsueh, David J. Konkin, Ron E. Knox, Yuefeng Ruan and Pierre R. Fobert
    Citation: BMC Genomics 2019 20:925
    Content type: Research article Published on:

  29. Changes to the environment as a result of human activities can result in a range of impacts on reef building corals that include coral bleaching (reduced concentrations of algal symbionts), decreased coral gro...

    Authors: Nedeljka Rosic, Paulina Kaniewska, Chon-Kit Kenneth Chan, Edmund Yew Siang Ling, David Edwards, Sophie Dove and Ove Hoegh-Guldberg
    Citation: BMC Genomics 2014 15:1052
    Content type: Research article Published on:

  30. Erwinia amylovora is generally considered to be a homogeneous species in terms of phenotypic and genetic features. However, strains show variation in their virulence, particularly on h...

    Authors: Joanna Puławska, Monika Kałużna, Wojciech Warabieda and Artur Mikiciński
    Citation: BMC Genomics 2017 18:868
    Content type: Research article Published on:

  31. Monocytes -key regulators of the innate immune response- are actively involved in the pathogenesis of systemic lupus erythematosus (SLE). We sought to identify novel compounds that might serve as monocyte-dire...

    Authors: Dimitrios Nikolakis, Panagiotis Garantziotis, George Sentis, Antonis Fanouriakis, George Bertsias, Eleni Frangou, Dionysis Nikolopoulos, Aggelos Banos and Dimitrios T Boumpas
    Citation: BMC Genomics 2023 24:207
    Content type: Research Published on:

  32. Liriodendron chinense is a distinctive ornamental tree species due to its unique leaves and tulip-like flowers. The discovery of genes involved in leaf development and morphogenesis is critical for uncovering the...

    Authors: Yaxian Zong, Ziyuan Hao, Zhonghua Tu, Yufang Shen, Chengge Zhang, Shaoying Wen, Lichun Yang, Jikai Ma and Huogen Li
    Citation: BMC Genomics 2021 22:807
    Content type: Research article Published on:

  33. The sea lamprey (Petromyzon marinus) is a jawless vertebrate that parasitizes fish as an adult and, with overfishing, was responsible for the decline in lake trout (Salvelinus namaycush) populations in the Great ...

    Authors: Frederick Goetz, Sara E. Smith, Giles Goetz and Cheryl A. Murphy
    Citation: BMC Genomics 2016 17:675
    Content type: Research article Published on:

  34. Lipid polymers in plant cell walls, such as cutin and suberin, build recalcitrant hydrophobic protective barriers. Their degradation is of foremost importance for both plant pathogenic and saprophytic fungi. R...

    Authors: Isabel Martins, Diego O Hartmann, Paula C Alves, Celso Martins, Helga Garcia, Céline C Leclercq, Rui Ferreira, Ji He, Jenny Renaut, Jörg D Becker and Cristina Silva Pereira
    Citation: BMC Genomics 2014 15:613
    Content type: Research article Published on:

  36. The genome of the fission yeast Schizosaccharomyces pombe has recently been sequenced, setting the stage for the post-genomic era of this increasingly popular model organism. We have built fission yeast microarra...

    Authors: Rachel Lyne, Gavin Burns, Juan Mata, Chris J Penkett, Gabriella Rustici, Dongrong Chen, Cordelia Langford, David Vetrie and Jürg Bähler
    Citation: BMC Genomics 2003 4:27
    Content type: Research article Published on:

  37. Dormant Mycobacterium tuberculosis bacilli are believed to play an important role in latent tuberculosis infection. Previously, we have demonstrated that cultivation of M. tuberculosis in K+-deficient medium resu...

    Authors: Dmitriy V. Ignatov, Elena G. Salina, Mikhail V. Fursov, Timofey A. Skvortsov, Tatyana L. Azhikina and Arseny S. Kaprelyants
    Citation: BMC Genomics 2015 16:954
    Content type: Research article Published on:

  38. Myostatin (MSTN), a member of the TGF-β superfamily, has been identified as a negative regulator of skeletal muscle mass. Inactivating mutations in the MSTN gene are responsible for the development of a hyperm...

    Authors: Ilham Chelh, Bruno Meunier, Brigitte Picard, Mark James Reecy, Catherine Chevalier, Jean-François Hocquette and Isabelle Cassar-Malek
    Citation: BMC Genomics 2009 10:196
    Content type: Research article Published on:

  39. Pinellia ternata (Thunb.) Briet., a valuable herb native to China, is susceptible to the “sprout tumble” phenomenon because of high temperatures, resulting in a significant yield reduction. However, the molecular...

    Authors: Chen Bo, Mengmeng Liu, Qian You, Xiao Liu, Yanfang Zhu, Yongbo Duan, Dexin Wang, Tao Xue and Jianping Xue
    Citation: BMC Genomics 2024 25:398
    Content type: Research Published on:

  41. Water stress limits plant survival and production in many parts of the world. Identification of genes and alleles responding to water stress conditions is important in breeding plants better adapted to drought...

    Authors: Bala R Thumma, Navin Sharma and Simon G Southerton
    Citation: BMC Genomics 2012 13:364
    Content type: Research article Published on:

  43. Bacterial blight, caused by Xanthomonas oryzae pv. oryzae (Xoo), is a devastating rice disease worldwide. Xa39 is a resistance (R) gene with a broad-spectrum hypersensitive response (BSHR) to Xoo. Nevertheless, t...

    Authors: Fan Zhang, Li-Yu Huang, Fan Zhang, Jauhar Ali, Casiana Vera Cruz, Da-Long Zhuo, Zheng-Lin Du, Zhi-kang Li and Yong-Li Zhou
    Citation: BMC Genomics 2015 16:111
    Content type: Research article Published on:

  44. Gibberellins are well known for their growth control function in flower, fruit and seed development, and as such, exogenous gibberellic acid (GA) application plays an important role in viticulture. Unfortunate...

    Authors: Chenxia Cheng, Chen Jiao, Stacy D Singer, Min Gao, Xiaozhao Xu, Yiming Zhou, Zhi Li, Zhangjun Fei, Yuejin Wang and Xiping Wang
    Citation: BMC Genomics 2015 16:128
    Content type: Research article Published on:

  45. Drought stress is the most limiting factor for plant growth and crop production worldwide. As a major cereal crop, wheat is susceptible to drought. Thus, discovering and utilizing drought-tolerant gene resourc...

    Authors: Fengkun Lu, Wenjing Duan, Yue Cui, Junwei Zhang, Dong Zhu, Ming Zhang and Yueming Yan
    Citation: BMC Genomics 2022 23:369
    Content type: Research Published on:

  46. Leaf rust, caused by the biotrophic fungal pathogen Puccinia hordei, is one of the most important foliar disease of barley (Hordeum vulgare) and represents a serious threat in many production regions of the world...

    Authors: Letizia Bernardo, Bhakti Prinsi, Alfredo Simone Negri, Luigi Cattivelli, Luca Espen and Giampiero Valè
    Citation: BMC Genomics 2012 13:642
    Content type: Research article Published on:

  47. Despite the intensive use of Bacillus thuringiensis israelensis (Bti) toxins for mosquito control, little is known about the long term effect of exposure to this cocktail of toxins on target mosquito populations....

    Authors: Laurence Després, Renaud Stalinski, Guillaume Tetreau, Margot Paris, Aurélie Bonin, Vincent Navratil, Stéphane Reynaud and Jean-Philippe David
    Citation: BMC Genomics 2014 15:926
    Content type: Research article Published on:

  48. The relationship between fish health and muscle growth is critical for continued expansion of the aquaculture industry. The effect of immune stimulation on the expression of genes related to the energy balance...

    Authors: Nicholas J Pooley, Luca Tacchi, Christopher J Secombes and Samuel AM Martin
    Citation: BMC Genomics 2013 14:747
    Content type: Research article Published on:

  49. Despite their widespread use, the biological mechanisms underlying the efficacy of psychotropic drugs are still incompletely known; improved understanding of these is essential for development of novel more ef...

    Authors: Michal Korostynski, Marcin Piechota, Jaroslaw Dzbek, Wiktor Mlynarski, Klaudia Szklarczyk, Barbara Ziolkowska and Ryszard Przewlocki
    Citation: BMC Genomics 2013 14:606
    Content type: Research article Published on:

  50. Long-term artificial selection for growth rate and lean meat rate has eventually led to meat quality deterioration. Muscle fiber type is a key factor that markedly affects meat quality. circRNAs have been repo...

    Authors: Xiaona Zhuang, Zekun Lin, Fang Xie, Junyi Luo, Ting Chen, Qianyun Xi, Yongliang Zhang and Jiajie Sun
    Citation: BMC Genomics 2022 23:294
    Content type: Research Published on:

Featured videos

View featured videos from across the BMC-series journals

Submit manuscript

Annual Journal Metrics

  • 2022 Citation Impact
    4.4 - 2-year Impact Factor
    4.7 - 5-year Impact Factor
    1.189 - SNIP (Source Normalized Impact per Paper)
    1.107 - SJR (SCImago Journal Rank)

    2023 Speed
    23 days submission to first editorial decision for all manuscripts (Median)
    137 days submission to accept (Median)

    2023 Usage
    7,167,242 downloads
    4,454 Altmetric mentions

Follow

Sign up for article alerts and news from this journal

BMC Genomics

ISSN: 1471-2164

Contact us