Skip to main content

Articles

6358 result(s) for 'general transcription factors vs specific' within BMC Genomics

Page 50 of 128

  1. For over a century, scientists have studied host-pathogen interactions between the crayfish plague disease agent Aphanomyces astaci and freshwater crayfish. It has been hypothesised that North American crayfish h...

    Authors: Ljudevit Luka Boštjančić, Caterina Francesconi, Christelle Rutz, Lucien Hoffbeck, Laetitia Poidevin, Arnaud Kress, Japo Jussila, Jenny Makkonen, Barbara Feldmeyer, Miklós Bálint, Klaus Schwenk, Odile Lecompte and Kathrin Theissinger
    Citation: BMC Genomics 2022 23:600
    Content type: Research article Published on:

    The Data note to this article has been published in BMC Research Notes 2022 15:281

  2. During the last two decades progress in the genetics of aging in invertebrate models such as C. elegans and D. melanogaster has clearly demonstrated the existence of regulatory pathways that control the rate of a...

    Authors: Fabrice Girardot, Christelle Lasbleiz, Véronique Monnier and Hervé Tricoire
    Citation: BMC Genomics 2006 7:69
    Content type: Research article Published on:

  3. Phytophthora infestans is the most devastating pathogen of potato and a model organism for the oomycetes. It exhibits high evolutionary potential and rapidly adapts to host plants. The P. infestans genome experie...

    Authors: Sylvain Raffaele, Joe Win, Liliana M Cano and Sophien Kamoun
    Citation: BMC Genomics 2010 11:637
    Content type: Research article Published on:

  4. Prostate cancer (PCa) is a leading cause of cancer-related death of men worldwide. There is an urgent need to develop novel biomarkers for PCa prognosis and diagnosis in the post prostate specific antigen era....

    Authors: Weirong Cui, Yulan Qian, Xiaoke Zhou, Yuxin Lin, Junfeng Jiang, Jiajia Chen, Zhongming Zhao and Bairong Shen
    Citation: BMC Genomics 2015 16(Suppl 7):S3
    Content type: Research Published on:

    This article is part of a Supplement: Volume 16 Supplement 7

  5. Marek’s disease virus (MDV) is an oncogenic herpesvirus that can cause T-cell lymphomas in chicken. Long noncoding RNA (lncRNA) is strongly associated with various cancers and many other diseases. In chickens,...

    Authors: Zhen You, Qinghe Zhang, Changjun Liu, Jiuzhou Song, Ning Yang and Ling Lian
    Citation: BMC Genomics 2019 20:245
    Content type: Research article Published on:

  6. Epithelial-mesenchymal transition (EMT) is an important process in embryonic development, especially during gastrulation and organ formation. Furthermore EMT is widely observed in pathological conditions, e.g....

    Authors: Priyank Shukla, Claus Vogl, Barbara Wallner, Doris Rigler, Mathias Müller and Sabine Macho-Maschler
    Citation: BMC Genomics 2015 16:944
    Content type: Research article Published on:

  7. Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao (A. mongolicus, family Leguminosae) is one of the most important traditional Chinese herbs. Among many secondary metabolites it produces, the effective bi...

    Authors: Jing Chen, Xue-Ting Wu, Yi-Qin Xu, Yang Zhong, Yi-Xue Li, Jia-Kuan Chen, Xuan Li and Peng Nan
    Citation: BMC Genomics 2015 16(Suppl 7):S15
    Content type: Research Published on:

    This article is part of a Supplement: Volume 16 Supplement 7

  8. Lipopolysaccharide (LPS) is a gram-negative bacterial antigen that triggers a series of cellular responses. LPS pre-conditioning was previously shown to improve the therapeutic efficacy of bone marrow stromal ...

    Authors: Ao Zhou, Meng Li, Bo He, Weixing Feng, Fei Huang, Bing Xu, A. Keith Dunker, Curt Balch, Baiyan Li, Yunlong Liu and Yue Wang
    Citation: BMC Genomics 2016 17(Suppl 7):509
    Content type: Research Published on:

    This article is part of a Supplement: Volume 17 Supplement 7

  9. Varroa destructor mites, and the numerous viruses they vector to their honey bee hosts, are among the most serious threats to honey bee populations, causing mortality and morbidity to both the individual honey be...

    Authors: Daniel B. Weaver, Brandi L. Cantarel, Christine G. Elsik, Dawn L. Boncristiani and Jay D. Evans
    Citation: BMC Genomics 2021 22:720
    Content type: Research Published on:

  10. The basidomycete Wallemia ichthyophaga from the phylogenetically distinct class Wallemiomycetes is the most halophilic fungus known to date. It requires at least 10% NaCl and thrives in saturated salt solution. T...

    Authors: Janja Zajc, Yongfeng Liu, Wenkui Dai, Zhenyu Yang, Jingzhi Hu, Cene Gostinčar and Nina Gunde-Cimerman
    Citation: BMC Genomics 2013 14:617
    Content type: Research article Published on:

  11. Lung cancer is the leading cause of cancer deaths in the world. The most common type of lung cancer is lung adenocarcinoma (AC). The genetic mechanisms of the early stages and lung AC progression steps are poo...

    Authors: Swee Heng Toh, Philip Prathipati, Efthimios Motakis, Chee Keong Kwoh, Surya Pavan Yenamandra and Vladimir A Kuznetsov
    Citation: BMC Genomics 2011 12(Suppl 3):S24
    Content type: Proceedings Published on:

    This article is part of a Supplement: Volume 12 Supplement 3

  13. High-grade serous ovarian carcinoma (HG-SOC) is the dominant tumor histologic type in epithelial ovarian cancers, exhibiting highly aberrant microRNA expression profiles and diverse pathways that collectively ...

    Authors: Vladimir A. Kuznetsov, Zhiqun Tang and Anna V. Ivshina
    Citation: BMC Genomics 2017 18(Suppl 6):692
    Content type: Research Published on:

    This article is part of a Supplement: Volume 18 Supplement 6

  15. Melon (Cucumis melo) is a horticultural specie of significant nutritional value, which belongs to the Cucurbitaceae family, whose economic importance is second only to the Solanaceae. Its small genome of approx. ...

    Authors: Albert Mascarell-Creus, Joaquin Cañizares, Josep Vilarrasa-Blasi, Santiago Mora-García, José Blanca, Daniel Gonzalez-Ibeas, Montserrat Saladié, Cristina Roig, Wim Deleu, Belén Picó-Silvent, Nuria López-Bigas, Miguel A Aranda, Jordi Garcia-Mas, Fernando Nuez, Pere Puigdomènech and Ana I Caño-Delgado
    Citation: BMC Genomics 2009 10:467
    Content type: Research article Published on:

  16. The pistillody mutant wheat (Triticum aestivum L.) plant HTS-1 exhibits homeotic transformation of stamens into pistils or pistil-like structures. Unlike common wheat varieties, HTS-1 produces three to six pistil...

    Authors: Zaijun Yang, Zhengsong Peng, Shuhong Wei, Mingli Liao, Yan Yu and Zeyan Jang
    Citation: BMC Genomics 2015 16:211
    Content type: Research article Published on:

  17. Gibel carp is an important aquaculture species in China, and a herpesvirus, called as Carassius auratus herpesvirus (CaHV), has hampered the aquaculture development. Diverse gynogenetic clones of gibel carp have ...

    Authors: Fan-Xiang Gao, Yang Wang, Qi-Ya Zhang, Cheng-Yan Mou, Zhi Li, Yuan-Sheng Deng, Li Zhou and Jian-Fang Gui
    Citation: BMC Genomics 2017 18:561
    Content type: Research article Published on:

  19. RNA sequencing technologies reveal that bacteria express RNA molecules other than mRNA, rRNA or tRNA. During the last years genome-wide bacterial transcriptomes have been shown to comprise intergenic RNA, anti...

    Authors: María Gómez-Lozano, Rasmus L Marvig, Monica VL Tulstrup and Søren Molin
    Citation: BMC Genomics 2014 15:783
    Content type: Research article Published on:

  20. Infectious bursal disease (IBD) is an economically very important issue to the poultry industry and it is one of the major threats to the nation’s food security. The pathogen, a highly pathogenic strain of a v...

    Authors: Bahiyah Azli, Sharanya Ravi, Mohd Hair-Bejo, Abdul Rahman Omar, Aini Ideris and Nurulfiza Mat Isa
    Citation: BMC Genomics 2021 22:461
    Content type: Research Published on:

  21. Glutamate plays a central position in the synthesis of a variety of organic molecules in plants and is synthesised from nitrate through a series of enzymatic reactions. Glutamate synthases catalyse the last st...

    Authors: Ralph Kissen, Per Winge, Diem Hong Thi Tran, Tommy S Jørstad, Trond R Størseth, Tone Christensen and Atle M Bones
    Citation: BMC Genomics 2010 11:190
    Content type: Research article Published on:

  22. The mammalian intestine is a complex biological system that exhibits functional plasticity in its response to diverse stimuli to maintain homeostasis. To improve our understanding of this plasticity, we perfor...

    Authors: Nirupama Benis, Jerry M. Wells, Mari A. Smits, Soumya Kanti Kar, Bart van der Hee, Vitor A. P. Martins dos Santos, Maria Suarez-Diez and Dirkjan Schokker
    Citation: BMC Genomics 2019 20:1028
    Content type: Research article Published on:

  23. In mammals, the ovary is the essential system of female reproduction for the onset of puberty, and the abnormal puberty has negative outcomes on health. CircRNA is a non-coding RNA produced by non-canonical al...

    Authors: Xiangchun Pan, Wentao Gong, Yingting He, Nian Li, Hao Zhang, Zhe Zhang, Jiaqi Li and Xiaolong Yuan
    Citation: BMC Genomics 2021 22:445
    Content type: Research Published on:

  24. Cadmium translocation from roots to shoots is a complex biological process that is controlled by gene regulatory networks. Pak choi exhibits wide cultivar variations in Cd accumulation. However, the molecular ...

    Authors: Rugang Yu, Dan Li, Xueling Du, Shenglan Xia, Caifeng Liu and Gangrong Shi
    Citation: BMC Genomics 2017 18:587
    Content type: Research article Published on:

  25. Bovine milk fat composition is responsive to dietary manipulation providing an avenue to modify the content of fatty acids and especially some specific unsaturated fatty acid (USFA) isomers of benefit to human...

    Authors: Ran Li, Frédéric Beaudoin, Adolf A. Ammah, Nathalie Bissonnette, Chaouki Benchaar, Xin Zhao, Chuzhao Lei and Eveline M. Ibeagha-Awemu
    Citation: BMC Genomics 2015 16:884
    Content type: Research article Published on:

  26. Nicotiana benthamiana is a widely used model plant species for research on plant-pathogen interactions as well as other areas of plant science. It can be easily transformed or agroinfi...

    Authors: Ivett Baksa, Tibor Nagy, Endre Barta, Zoltán Havelda, Éva Várallyay, Dániel Silhavy, József Burgyán and György Szittya
    Citation: BMC Genomics 2015 16:1025
    Content type: Research article Published on:

  27. Sorghum grain mold is the most important disease of the crop. The disease results from simultaneous infection of the grain by multiple fungal species. Host responses to these fungi and the underlying molecular...

    Authors: Habte Nida, Sanghun Lee, Ying Li and Tesfaye Mengiste
    Citation: BMC Genomics 2021 22:295
    Content type: Research Published on:

  28. Core promoter controls transcription initiation. However, little is known for core promoter diversity in the human genome and its relationship with diseases. We hypothesized that as a functional important comp...

    Authors: Hemant Gupta, Khyati Chandratre, Siddharth Sinha, Teng Huang, Xiaobing Wu, Jian Cui, Michael Q. Zhang and San Ming Wang
    Citation: BMC Genomics 2020 21:842
    Content type: Research article Published on:

  29. MicroRNAs (miRNAs) are an abundant class of small single-stranded non-coding RNA molecules ranging from 18 to 24 nucleotides. They negatively regulate gene expression at the post-transcriptional level and play...

    Authors: Clémence Desjardin, Anne Vaiman, Xavier Mata, Rachel Legendre, Johan Laubier, Sean P Kennedy, Denis Laloe, Eric Barrey, Claire Jacques, Edmond P Cribiu and Laurent Schibler
    Citation: BMC Genomics 2014 15:798
    Content type: Research article Published on:

  30. Zebrafish embryos are transcriptionally silent until activation of the zygotic genome during the 10th cell cycle. Onset of transcription is followed by cellular and morphological changes involving cell speciation...

    Authors: Håvard Aanes, Olga Østrup, Ingrid S Andersen, Lars F Moen, Sinnakaruppan Mathavan, Philippe Collas and Peter Alestrom
    Citation: BMC Genomics 2013 14:331
    Content type: Research article Published on:

  31. Psoriasis is an immune-mediated disease characterised by chronically elevated pro-inflammatory cytokine levels, leading to aberrant keratinocyte proliferation and differentiation. Although certain clinical phe...

    Authors: Chrysanthi Ainali, Najl Valeyev, Gayathri Perera, Andrew Williams, Johann E Gudjonsson, Christos A Ouzounis, Frank O Nestle and Sophia Tsoka
    Citation: BMC Genomics 2012 13:472
    Content type: Research article Published on:

  32. Trait loss is a pervasive phenomenon in evolution, yet the underlying molecular causes have been identified in only a handful of cases. Most of these cases involve loss-of-function mutations in one or more tra...

    Authors: Mark Lammers, Ken Kraaijeveld, Janine Mariën and Jacintha Ellers
    Citation: BMC Genomics 2019 20:309
    Content type: Research article Published on:

  33. Sockeye Salmon are an iconic species widely distributed throughout the North Pacific. A devastating pathogen of Sockeye Salmon is infectious hematopoietic necrosis virus (IHNV, genus Novirhabdovirus, family Rhabd...

    Authors: Anita Müller, Ben J. G. Sutherland, Ben F. Koop, Stewart C. Johnson and Kyle A. Garver
    Citation: BMC Genomics 2015 16:634
    Content type: Research article Published on:

  34. The formation of flowers is one of the main model systems to elucidate the molecular mechanisms that control developmental processes in plants. Although several studies have explored gene expression during flo...

    Authors: Patrick T. Ryan, Diarmuid S. Ó’Maoiléidigh, Hajk-Georg Drost, Kamila Kwaśniewska, Alexander Gabel, Ivo Grosse, Emmanuelle Graciet, Marcel Quint and Frank Wellmer
    Citation: BMC Genomics 2015 16:488
    Content type: Research article Published on:

  35. Macrobrachium nipponense is a freshwater prawn of economic importance in China. Its reproductive molt is crucial for seedling rearing and directly impacts the industry’s economic efficiency. 20-hydroxyecdysone (2...

    Authors: Huwei Yuan, Pengfei Cai, Wenyi Zhang, Shubo Jin, Sufei Jiang, Yiwei Xiong, Yongsheng Gong, Hui Qiao and Hongtuo Fu
    Citation: BMC Genomics 2024 25:35
    Content type: Research Published on:

  36. Expansion of aquaculture requires alternative feeds and breeding strategies to reduce dependency on fish oil (FO) and better utilization of dietary vegetable oil (VO). Despite the central role of intestine in ...

    Authors: Sofia Morais, Tomé Silva, Odete Cordeiro, Pedro Rodrigues, Derrick R Guy, James E Bron, John B Taggart, J Gordon Bell and Douglas R Tocher
    Citation: BMC Genomics 2012 13:448
    Content type: Research article Published on:

  37. Otitis media is the most common disease of childhood, and represents an important health challenge to the 10-15% of children who experience chronic/recurrent middle ear infections. The middle ear undergoes ext...

    Authors: Michelle Hernandez, Anke Leichtle, Kwang Pak, Nicholas J Webster, Stephen I Wasserman and Allen F Ryan
    Citation: BMC Genomics 2015 16:259
    Content type: Research article Published on:

  38. The transmission of the malaria parasite Plasmodium falciparum from the human to the mosquito is mediated by dormant sexual precursor cells, the gametocytes, which become activated in the mosquito midgut. Because...

    Authors: Che Julius Ngwa, Matthias Scheuermayer, Gunnar Rudolf Mair, Selina Kern, Thomas Brügl, Christine Clara Wirth, Makoah Nigel Aminake, Jochen Wiesner, Rainer Fischer, Andreas Vilcinskas and Gabriele Pradel
    Citation: BMC Genomics 2013 14:256
    Content type: Research article Published on:

  39. The molecular bases of mammalian pancreatic α cells higher resistance than β to proinflammatory cytokines are very poorly defined. MicroRNAs are master regulators of cell networks, but only scanty data are ava...

    Authors: Davide Barbagallo, Salvatore Piro, Angelo G Condorelli, Loriana G Mascali, Francesca Urbano, Nunziatina Parrinello, Adelina Monello, Luisa Statello, Marco Ragusa, Agata M Rabuazzo, Cinzia Di Pietro, Francesco Purrello and Michele Purrello
    Citation: BMC Genomics 2013 14:62
    Content type: Research article Published on:

  40. Cucumber is an important melon crop in the world, with different pericarp colors. However, the candidate genes and the underlying genetic mechanism for such an important trait in cucumber are unknown. In this ...

    Authors: Hongyu Huang, Qinqin Yang, Lidong Zhang, Weiliang Kong, Huizhe Wang, Aimin Wei, Shengli Du, Ruihuan Yang, Jiawang Li, Tao Lin, Xiaolin Geng and Yuhe Li
    Citation: BMC Genomics 2022 23:383
    Content type: Research Published on:

  41. Maize is one of the primary crops of genetic manipulation, which provides an excellent means of promoting stress resistance and increasing yield. However, the differences in induction and regeneration capacity...

    Authors: Xiaoling Zhang, Yanli Wang, Yuanyuan Yan, Hua Peng, Yun Long, Yinchao Zhang, Zhou Jiang, Peng Liu, Chaoying Zou, Huanwei Peng, Guangtang Pan and Yaou Shen
    Citation: BMC Genomics 2019 20:159
    Content type: Research article Published on:

  42. In the filamentous cyanobacterium Nostoc punctiforme ATCC 29133, removal of combined nitrogen induces the differentiation of heterocysts, a cell-type specialized in N2 fixation. The differentiation involves genom...

    Authors: Gustaf Sandh, Margareta Ramström and Karin Stensjö
    Citation: BMC Genomics 2014 15:1064
    Content type: Research article Published on:

  43. Genomic resources for plant and animal species that are under exploitation primarily for human consumption are increasingly important, among other things, for understanding physiological processes and for esta...

    Authors: Laia Ribas, Belén G Pardo, Carlos Fernández, José Antonio Álvarez-Diós, Antonio Gómez-Tato, María Isabel Quiroga, Josep V Planas, Ariadna Sitjà-Bobadilla, Paulino Martínez and Francesc Piferrer
    Citation: BMC Genomics 2013 14:180
    Content type: Research article Published on:

  44. ChIP-seq provides new opportunities to study allele-specific protein-DNA binding (ASB). However, detecting allelic imbalance from a single ChIP-seq dataset often has low statistical power since only sequence r...

    Authors: Yingying Wei, Xia Li, Qian-fei Wang and Hongkai Ji
    Citation: BMC Genomics 2012 13:681
    Content type: Methodology article Published on:

  45. Due to its overarching role in genome function, sequence-dependent DNA curvature continues to attract great attention. The DNA double helix is not a rigid cylinder, but presents both curvature and flexibility ...

    Authors: Ali Masoudi-Nejad, Sara Movahedi and Ruy Jáuregui
    Citation: BMC Genomics 2011 12:214
    Content type: Research article Published on:

  46. Chinese fir (Cunninghamia lanceolata) is an important timber species that accounts for 20–30% of the total commercial timber production in China. However, the available genomic information of Chinese fir is limit...

    Authors: Hua-Hong Huang, Li-Li Xu, Zai-Kang Tong, Er-Pei Lin, Qing-Po Liu, Long-Jun Cheng and Mu-Yuan Zhu
    Citation: BMC Genomics 2012 13:648
    Content type: Research article Published on:

  47. Long non-coding RNA (lncRNA) as an important regulator has been demonstrated playing an indispensable role in the biological process of hair follicles (HFs) growth. However, their function and expression profi...

    Authors: Xiaolan Zhang, Qi Bao, Congjun Jia, Chen Li, Yongfang Chang, Xiaoyun Wu, Chunnian Liang, Pengjia Bao and Ping Yan
    Citation: BMC Genomics 2020 21:681
    Content type: Research article Published on:

  49. Although an adverse early-life environment has been linked to an increased risk of developing the metabolic syndrome, the molecular mechanisms underlying altered disease susceptibility as well as their relevan...

    Authors: Bright Starling Emerald, Keefe Chng, Shinya Masuda, Deborah M Sloboda, Mark H Vickers, Ravi Kambadur and Peter D Gluckman
    Citation: BMC Genomics 2011 12:509
    Content type: Research article Published on:

  50. DNA repair genes provide an important contribution towards the surveillance and repair of DNA damage. These genes produce a large network of interacting proteins whose mRNA expression is likely to be regulated...

    Authors: Jens Lichtenberg, Edwin Jacox, Joshua D Welch, Kyle Kurz, Xiaoyu Liang, Mary Qu Yang, Frank Drews, Klaus Ecker, Stephen S Lee, Laura Elnitski and Lonnie R Welch
    Citation: BMC Genomics 2009 10(Suppl 1):S18
    Content type: Research Published on:

    This article is part of a Supplement: Volume 10 Supplement 1

Featured videos

View featured videos from across the BMC-series journals

Submit manuscript

Annual Journal Metrics

  • Citation Impact 2023
    Journal Impact Factor: 3.5
    5-year Journal Impact Factor: 4.1
    Source Normalized Impact per Paper (SNIP): 1.083
    SCImago Journal Rank (SJR): 1.047

    Speed 2023
    Submission to first editorial decision (median days): 21
    Submission to acceptance (median days): 137

    Usage 2023
    Downloads: 7,167,242
    Altmetric mentions: 4,454

Follow

Sign up for article alerts and news from this journal

BMC Genomics

ISSN: 1471-2164

Contact us