Skip to main content

Articles

Page 12 of 332

  1. Tree peony (Paeonia sect. Moutan DC.) is a famous flower native to China with high ornamental, medicinal, and oil value. However, the low regeneration rate of callus is one of the main constraints for the establi...

    Authors: Wanqing Zhang, Hongxiao Zhang, Guodong Zhao, Na Wang, Lili Guo and Xiaogai Hou
    Citation: BMC Genomics 2023 24:665
    Content type: Research Published on:

  2. Microproteins, prevalent across all kingdoms of life, play a crucial role in cell physiology and human health. Although global gene transcription is widely explored and abundantly available, our understanding ...

    Authors: Bowen Zhao, Jing Zhao, Muyao Wang, Yangfan Guo, Aamir Mehmood, Weibin Wang, Yi Xiong, Shenggan Luo, Dong-Qing Wei, Xin-Qing Zhao and Yanjing Wang
    Citation: BMC Genomics 2023 24:661
    Content type: Database Published on:

  3. Milk production traits are complex traits with vital economic importance in the camel industry. However, the genetic mechanisms regulating milk production traits in camels remain poorly understood. Therefore, ...

    Authors: Huaibing Yao, Zhihua Dou, Zhongkai Zhao, Xiaorui Liang, Haitao Yue, Wanpeng Ma, Zhanqiang Su, Yuzhuo Wang, Zelin Hao, Hui Yan, Zhuangyuan Wu, Liang Wang, Gangliang Chen and Jie Yang
    Citation: BMC Genomics 2023 24:660
    Content type: Research Published on:

  4. As an important vegetable crop, cultivated lettuce is grown worldwide and a great variety of agronomic traits have been preserved within germplasm collections. The mechanisms underlying these phenotypic variat...

    Authors: Zhaowu Zhang, Rob van Treuren, Ting Yang, Yulan Hu, Wenhui Zhou, Huan Liu and Tong Wei
    Citation: BMC Genomics 2023 24:659
    Content type: Research Published on:

  5. Wolfberry is rich in carotenoids, flavonoids, vitamins, alkaloids, betaines and other bioactive ingredients. For over 2,000 years, wolfberry has been used in China as a medicinal and edible plant resource. Nev...

    Authors: Xuexia Liu, Rui Zheng, Yasmina Radani, Han Gao, Sijun Yue, Wenqiang Fan, Jianning Tang, Jing Shi and Jinzhong Zhu
    Citation: BMC Genomics 2023 24:658
    Content type: Research Published on:

  6. Wolbachia is a genus of maternally inherited endosymbionts that can affect reproduction of their hosts and influence metabolic processes. The pollinator, Valisia javana, is common in the male syconium of the dioe...

    Authors: Wanzhen Liu, Xue Xia, Ary A. Hoffmann, Yamei Ding, Ji-Chao Fang and Hui Yu
    Citation: BMC Genomics 2023 24:657
    Content type: Research Published on:

  7. To date genomic studies on Map have concentrated on Type C strains with only a few Type S strains included for comparison. In this study the entire pan-genome of 261 Map genomes (205 Type C, 52 Type S and 4 Ty...

    Authors: Rachel Hodgeman, Rachel Mann, Noel Djitro, Keith Savin, Simone Rochfort and Brendan Rodoni
    Citation: BMC Genomics 2023 24:656
    Content type: Research Published on:

  8. Declining oocyte quality in women with advanced age has been a major impediment to assisted reproductive treatments’ (ART) success rate. However, aging is often accompanied by a diminished ovarian reserve (DOR...

    Authors: Cong Zhang, Shi Song, Ming Yang, Liying Yan and Jie Qiao
    Citation: BMC Genomics 2023 24:655
    Content type: Research Published on:

  10. Authors: Yuuki Kobayashi, Ayane Kayamori, Keita Aoki, Yuh Shiwa, Minenosuke Matsutani, Nobuyuki Fujita, Takashi Sugita, Wataru Iwasaki, Naoto Tanaka and Masako Takashima
    Citation: BMC Genomics 2023 24:653
    Content type: Correction Published on:

    The original article was published in BMC Genomics 2023 24:609

  12. Mapping genetic interactions is essential for determining gene function and defining novel biological pathways. We report a simple to use CRISPR interference (CRISPRi) based platform, compatible with Fluoresce...

    Authors: Alina Guna, Katharine R. Page, Joseph M. Replogle, Theodore K. Esantsi, Maxine L. Wang, Jonathan S. Weissman and Rebecca M. Voorhees
    Citation: BMC Genomics 2023 24:651
    Content type: Research Published on:

  14. The Kazakhs are one of the biggest Turkic-speaking ethnic groups, controlling vast swaths of land from the Altai to the Caspian Sea. In terms of area, Kazakhstan is ranked ninth in the world. Northern, Eastern...

    Authors: Yeldar Ashirbekov, Madina Seidualy, Arman Abaildayev, Albina Maxutova, Aigul Zhunussova, Ainur Akilzhanova, Kamalidin Sharipov, Zhaxylyk Sabitov and Maxat Zhabagin
    Citation: BMC Genomics 2023 24:649
    Content type: Research Published on:

  15. The Begonia species are common shade plants that are mostly found in southwest China. They have not been well studied despite their medicinal and decorative uses because gene penetration, decreased adaptability, ...

    Authors: Chao Xiong, Yang Huang, Zhenglong Li, Lan Wu, Zhiguo Liu, Wenjun Zhu, Jianhui Li, Ran Xu and Xin Hong
    Citation: BMC Genomics 2023 24:648
    Content type: Research Published on:

  16. Feed efficiency is a research priority to support a sustainable meat production. It is recognized as a complex trait that integrates multiple biological pathways orchestrated in and by various tissues. This st...

    Authors: Camille Juigné, Emmanuelle Becker and Florence Gondret
    Citation: BMC Genomics 2023 24:647
    Content type: Research Published on:

  17. The mammalian oviduct is a complex, fibromuscular organ known for its role in orchestrating a series of timely and dynamic changes to suitably support early embryogenesis. Climate change-induced heat stress (H...

    Authors: Nico G. Menjivar, Ahmed Gad, Riley E. Thompson, Mindy A. Meyers, Fiona K. Hollinshead and Dawit Tesfaye
    Citation: BMC Genomics 2023 24:646
    Content type: Research Published on:

  18. Takifugu fasciatus is an aquaculture species with high economic value. In recent years, problems such as environmental pollution and inbreeding have caused a serious decline in T. fasciatus germplasm resources. I...

    Authors: Ying Zhang, Jie Li, Peng Chu, Ruhua Shang, Shaowu Yin and Tao Wang
    Citation: BMC Genomics 2023 24:645
    Content type: Research Published on:

  19. Understanding changes in cell identity in cancer and ageing is of great importance. In this work, we analyzed how gene expression changes in human tissues are associated with tissue specificity during cancer a...

    Authors: Gabriel Arantes dos Santos, Kasit Chatsirisupachai, Roberto A. Avelar and João Pedro de Magalhães
    Citation: BMC Genomics 2023 24:644
    Content type: Research Published on:

  20. Long non-coding RNAs (lncRNAs) play critical roles in various biological processes in plants. Extensive studies utilizing high-throughput RNA sequencing have revealed that many lncRNAs are involved in plant di...

    Authors: Minghua Li, Wei Li, Meixia Zhao, Zhiqiang Li, Guo-Liang Wang, Wende Liu and Chun Liang
    Citation: BMC Genomics 2023 24:643
    Content type: Research Published on:

  21. Barley (Hordeum vulgare) is one of the most popular cereal crops globally. Although it is a diploid species, (2n = 2x = 14) the study of its genome organization is necessary in the framework of plant breeding sin...

    Authors: I. M. Serrano-León, P. Prieto and M. Aguilar
    Citation: BMC Genomics 2023 24:642
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2023 24:694

  22. MicroRNAs (miRNAs) are important post-transcriptional gene regulators controlling cellular lineage specification and differentiation during embryonic development, including the gastrointestinal system. However...

    Authors: Yu-Han Hung, Meghan Capeling, Jonathan W. Villanueva, Matt Kanke, Michael T. Shanahan, Sha Huang, Rebecca Cubitt, Vera D. Rinaldi, John C. Schimenti, Jason R. Spence and Praveen Sethupathy
    Citation: BMC Genomics 2023 24:641
    Content type: Research Published on:

  23. The study was conducted to find out the candidate microRNA (miRNA) and genes that associated with sperm motility of Yili goose through small RNA sequencing of testicular tissue of Yili goose, and provide a the...

    Authors: Yingping Wu, Lihua Zhang, Haiying Li, Xiaoyu Zhao, Yawen Ding, Yingying Yao and Ling Wang
    Citation: BMC Genomics 2023 24:640
    Content type: Research Published on:

  24. Microbes live within complex communities of interacting populations, either free-living in waters and soils or symbionts of animals and plants. Their interactions include the production of antimicrobial peptid...

    Authors: Claudia Teso-Pérez, Manuel Martínez-Bueno, Juan Manuel Peralta Sánchez, Eva Valdivia, María Esther Fárez-Vidal and Antonio Manuel Martín-Platero
    Citation: BMC Genomics 2023 24:639
    Content type: Research Published on:

  25. Although it is known that variation in the aldehyde dehydrogenase 2 (ALDH2) gene family influences the East Asian alcohol flushing response, knowledge about other genetic variants that affect flushing symptoms is...

    Authors: Yoonsu Cho, Kuang Lin, Su-Hyun Lee, Canqing Yu, Dan Schmidt Valle, Daniel Avery, Jun Lv, Keumji Jung, Liming Li, George Davey Smith, China Kadoorie Biobank Collaborative Group, Dianjianyi Sun, Zhengming Chen, Iona Y. Millwood, Gibran Hemani and Robin G. Walters
    Citation: BMC Genomics 2023 24:638
    Content type: Research Published on:

  26. Polyadenylation is a crucial process that terminates mRNA molecules at their 3′-ends. It has been observed that alternative polyadenylation (APA) can generate multiple transcripts from a single gene locus, eac...

    Authors: Zhenying Peng, Shuang Yu, Jingjing Meng, Kai-Hua Jia, Jialei Zhang, Xinguo Li, Wenwei Gao and Shubo Wan
    Citation: BMC Genomics 2023 24:637
    Content type: Research Published on:

  27. Insects are an important reservoir of viral biodiversity, but the vast majority of viruses associated with insects have not been discovered. Recent studies have employed high-throughput RNA sequencing, which h...

    Authors: Paula Rozo-Lopez, William Brewer, Simon Käfer, McKayla M. Martin and Benjamin J. Parker
    Citation: BMC Genomics 2023 24:636
    Content type: Research Published on:

  28. With the promotion of “One Health,” the health of animals and their impact on the environment have become major concerns recently. Widely distributed in China, the whooper swans (Cygnus cygnus) and black swans (C...

    Authors: Yin Fu, Kaihui Zhang, Fa Shan, Junqiang Li, Yilin Wang, Xiaoying Li, Huiyan Xu, Ziyang Qin and Longxian Zhang
    Citation: BMC Genomics 2023 24:635
    Content type: Research Published on:

  29. Exploring evolution regularities of genome sequences and constructing more objective species evolution relationships at the genomic level are high-profile topics. Based on the evolution mechanism of genome seq...

    Authors: Xiaolong Li, Hong Li, Zhenhua Yang, Yuan Wu and Mengchuan Zhang
    Citation: BMC Genomics 2023 24:634
    Content type: Research Published on:

  30. Nitrate is a primary nitrogen source for plant growth, and previous studies have indicated a correlation between nitrogen and browning. Nitrate transporters (NRTs) are crucial in nitrate allocation. Here, we util...

    Authors: Jin Feng, Can Zhu, Jiaqi Cao, Chen Liu, Jiaqi Zhang, Fuliang Cao and Xiaohong Zhou
    Citation: BMC Genomics 2023 24:633
    Content type: Research Published on:

  31. Tan and Hu sheep are well-known local breeds in China, producing lamb fur with unique ornamental and practical values highly appreciated by consumers worldwide. Fur quality is optimal at one month of age and g...

    Authors: Letian Zhang, Jiankui Wang, Ganxian Cai, Lina Ma, Zhengwei Zhao, Qing Ma and Xuemei Deng
    Citation: BMC Genomics 2023 24:632
    Content type: Research Published on:

  32. Host genetics influences the development of infectious diseases in many agricultural animal species. Identifying genes associated with disease development has the potential to make selective breeding for disea...

    Authors: Konstantin Divilov, Noah Merz, Blaine Schoolfield, Timothy J. Green and Chris Langdon
    Citation: BMC Genomics 2023 24:631
    Content type: Research Published on:

  33. Background Puccinia arachidis fungus causes rust disease in the peanut plants (Arachis hypogaea L.), which leads to high yield loss. Metabolomic profiling of Arachis hypogaea was performed to identify the pathoge...

    Authors: Visha Rathod, Khyati Rathod, Rukam S. Tomar, Ritisha Tatamiya, Rasmieh Hamid, Feba Jacob and Nasreen Shakil Munshi
    Citation: BMC Genomics 2023 24:630
    Content type: Research Published on:

  34. Auxin is an important hormone in plants and the PIN-FORMED (PIN) genes are essential to auxin distribution in growth and developmental processes of plants. Peanut is an influential cash crop, but research into PI...

    Authors: Jianxin Bian, Yuanyuan Cui, Jihua Li, Yu Guan, Shuhua Tian and Xiaoqin Liu
    Citation: BMC Genomics 2023 24:629
    Content type: Research Published on:

  35. The survival and fertility of heifers are critical factors for the success of dairy farms. The mortality of heifers poses a significant challenge to the management and profitability of the dairy industry. In d...

    Authors: Yahui Gao, Alexis Marceau, Victoria Iqbal, Jose Antonio Torres-Vázquez, Mahesh Neupane, Jicai Jiang, George E. Liu and Li Ma
    Citation: BMC Genomics 2023 24:628
    Content type: Research Published on:

  37. Phytophthora root rot caused by the oomycete Phytophthora capsici is the most devastating disease in pepper production worldwide, and current management strategies have not been effective in preventing this disea...

    Authors: Gang Lei, Kun-Hua Zhou, Xue-Jun Chen, Yue-Qin Huang, Xin-Jie Yuan, Ge-Ge Li, Yuan-Yuan Xie and Rong Fang
    Citation: BMC Genomics 2023 24:626
    Content type: Research Published on:

  39. Anaerobic parasitic ciliates are a specialized group of ciliates that are adapted to anoxic and oxygen-depleted habitats. Among them, Balantidium polyvacuolum, which inhabits the hindgut of Xenocyprinae fishes, h...

    Authors: Xia-lian Bu, Wei-shan Zhao, Zhong-yang Li, Hong-wei Ma, Yu-shun Chen, Wen-xiang Li, Hong Zou, Ming Li and Gui-tang Wang
    Citation: BMC Genomics 2023 24:624
    Content type: Research Published on:

  40. Establishment of DNA methylation (DNAme) patterns is essential for balanced multi-lineage cellular differentiation, but exactly how these patterns drive cellular phenotypes is unclear. While > 80% of CpG sites...

    Authors: Timothy J. Scott, Tyler J. Hansen, Evonne McArthur and Emily Hodges
    Citation: BMC Genomics 2023 24:623
    Content type: Research Published on:

  41. Exploring Brevibacterium strains from various ecosystems may lead to the discovery of new antibiotic-producing strains. Brevibacterium sp. H-BE7, a strain isolated from marine sediments from Northern Patagonia, C...

    Authors: Andrés Cumsille, Néstor Serna-Cardona, Valentina González, Fernanda Claverías, Agustina Undabarrena, Vania Molina, Francisco Salvà-Serra, Edward R.B. Moore and Beatriz Cámara
    Citation: BMC Genomics 2023 24:622
    Content type: Research Published on:

  42. Puberty marks the end of childhood and achieve sexual maturation and fertility. The role of hypothalamic proteins in regulating puberty onset is unclear. We performed a comprehensive differential proteomics an...

    Authors: Jing Ye, Xu Yan, Wei Zhang, Juntai Lu, Shuangshuang Xu, Xiaoqian Li, Ping Qin, Xinbao Gong, Ya Liu, Yinghui Ling, Yunsheng Li, Yunhai Zhang and Fugui Fang
    Citation: BMC Genomics 2023 24:621
    Content type: Research Published on:

  43. Plants respond to stress through highly tuned regulatory networks. While prior works identified master regulators of iron deficiency responses in A. thaliana from whole-root data, identifying regulators that a...

    Authors: Selene R. Schmittling, DurreShahwar Muhammad, Samiul Haque, Terri A. Long and Cranos M. Williams
    Citation: BMC Genomics 2023 24:620
    Content type: Research Published on:

  44. To explore the potential network markers and related signaling pathways of human B cells infected by COVID-19, we performed standardized integration and analysis of single-cell sequencing data to construct con...

    Authors: Ying Li, Liqin Han, Peiluan Li, Jing Ge, Yun Xue and Luonan Chen
    Citation: BMC Genomics 2023 24:619
    Content type: Research Published on:

  45. Extravillous trophoblast cell (EVT) differentiation and its communication with maternal decidua especially the leading immune cell type natural killer (NK) cell are critical events for placentation. However, a...

    Authors: Bai-Mei Zhuang, Dan-Dan Cao, Tian-Xi Li, Xiao-Feng Liu, Min-Min Lyu, Si-Dong Wang, Xin-Yuan Cui, Li Wang, Xiao-Lin Chen, Xiao-Li Lin, Cheuk-Lun Lee, Philip C.N. Chiu, William S.B. Yeung and Yuan-Qing Yao
    Citation: BMC Genomics 2023 24:618
    Content type: Research Published on:

  46. Oculomotor nerve palsy (ONP) is a neuroparalytic disorder resulting in dysfunction of innervating extraocular muscles (EOMs), of which the pathological characteristics remain underexplored.

    Authors: Mingsu Shi, Yanxi Fang, Yu Liang, Yuxiang Hu, Jiaqiu Huang, Weiyi Xia, Hewei Bian, Qiao Zhuo, Lianqun Wu and Chen Zhao
    Citation: BMC Genomics 2023 24:617
    Content type: Research Published on:

  47. Elucidating genome-wide structural variants including copy number variations (CNVs) have gained increased significance in recent times owing to their contribution to genetic diversity and association with impo...

    Authors: Sheikh Firdous Ahmad, Celus Chandrababu Shailaja, Sakshi Vaishnav, Amit Kumar, Gyanendra Kumar Gaur, Sarath Chandra Janga, Syed Mudasir Ahmad, Waseem Akram Malla and Triveni Dutt
    Citation: BMC Genomics 2023 24:616
    Content type: Research Published on:

  48. Understanding the microflora inhabiting the reproductive tract is important for a better understanding of female physiology and reproductive health. The endometrial fluid from mice in three reproductive stages...

    Authors: Sisi Pu, Meng Wang, Jinglei Wang, Qian Zhang, Xin Ma, Rui Wang, Sijiu Yu, Libin Wang and Yangyang Pan
    Citation: BMC Genomics 2023 24:615
    Content type: Research Published on:

  49. Chromosomal compartmentalization plays a critical role in maintaining proper transcriptional programs in cell differentiation and oncogenesis. However, currently the prevalent method for comparative analysis o...

    Authors: Yan Kai, Nan Liu, Stuart H. Orkin and Guo-Cheng Yuan
    Citation: BMC Genomics 2023 24:614
    Content type: Research Published on:

  50. The domestic dog, Canis lupus familiaris, is a companion animal for humans as well as an animal model in cancer research due to similar spontaneous occurrence of cancers as humans. Despite the social and biologic...

    Authors: In Seok Yang, Insu Jang, Jin Ok Yang, Jinhyuk Choi, Min-Seo Kim, Ka-Kyung Kim, Byung-Joon Seung, Jae-Ho Cheong, Jung-Hyang Sur, Hojung Nam, Byungwook Lee, Junho Kim and Sangwoo Kim
    Citation: BMC Genomics 2023 24:613
    Content type: Database Published on:

Featured videos

View featured videos from across the BMC-series journals

Submit manuscript

Annual Journal Metrics

  • 2022 Citation Impact
    4.4 - 2-year Impact Factor
    4.7 - 5-year Impact Factor
    1.189 - SNIP (Source Normalized Impact per Paper)
    1.107 - SJR (SCImago Journal Rank)

    2023 Speed
    23 days submission to first editorial decision for all manuscripts (Median)
    137 days submission to accept (Median)

    2023 Usage
    7,167,242 downloads
    4,454 Altmetric mentions

Follow

Sign up for article alerts and news from this journal

BMC Genomics

ISSN: 1471-2164

Contact us