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  1. Genetically modified (GM) crop plants with transgenic expression of Bacillus thuringiensis (Bt) pesticidal proteins are used to manage feeding damage by pest insects. The durability of this technology is threaten...

    Authors: Yangzhou Wang, Yao Yao, Yunyue Zhang, Xueyan Qian, Dongquan Guo and Brad S. Coates
    Citation: BMC Genomics 2024 25:355
  2. The homeodomain-leucine zipper (HD-Zip) gene family plays a pivotal role in plant development and stress responses. Nevertheless, a comprehensive characterization of the HD-Zip gene family in kiwifruit has bee...

    Authors: Kai-yu Ye, Jie-wei Li, Fa-ming Wang, Jian-you Gao, Cui-xia Liu, Hong-juan Gong, Bei-bei Qi, Ping-ping Liu, Qiao-sheng Jiang, Jian-min Tang and Quan-hui Mo
    Citation: BMC Genomics 2024 25:354
  3. Mosquitoes are prolific vectors of human pathogens, therefore a clear and accurate understanding of the organization of their antimicrobial defenses is crucial for informing the development of transmission con...

    Authors: Bretta Hixson, Louise Huot, Bianca Morejon, Xiaowei Yang, Peter Nagy, Kristin Michel and Nicolas Buchon
    Citation: BMC Genomics 2024 25:353
  4. Posterior capsular opacification (PCO) is the main reason affecting the long-term postoperative result of cataract patient, and it is well accepted that fibrotic PCO is driven by transforming growth factor bet...

    Authors: Cong Fan, Chao Wang, Yan Wang and Jian Jiang
    Citation: BMC Genomics 2024 25:352
  5. The fleece traits are important economic traits of goats. With the reduction of sequencing and genotyping cost and the improvement of related technologies, genomic selection for goats has become possible. The ...

    Authors: Xiaochun Yan, Jinquan Li, Libing He, Oljibilig Chen, Na Wang, Shuai Wang, Xiuyan Wang, Zhiying Wang and Rui Su
    Citation: BMC Genomics 2024 25:349
  6. Insecticide resistance (IR) is one of the major threats to malaria vector control programs in endemic countries. However, the mechanisms underlying IR are poorly understood. Thus, investigating gene expression...

    Authors: Helga Saizonou, Lucy Mackenzie Impoinvil, Dieunel Derilus, Diana Omoke, Stephen Okeyo, Nsa Dada, Claudia Corredor, Nicola Mulder, Audrey Lenhart, Eric Ochomo and Luc S. Djogbénou
    Citation: BMC Genomics 2024 25:348
  7. Mammalian follicle development is characterized by extensive changes in morphology, endocrine responsiveness, and function, providing the optimum environment for oocyte growth, development, and resumption of m...

    Authors: Lais Barbosa Latorraca, António Galvão, Maria Belen Rabaglino, Julieta Maria D’Augero, Gavin Kelsey and Trudee Fair
    Citation: BMC Genomics 2024 25:335
  8. The ascomycete fungus Anisogramma anomala causes Eastern Filbert Blight (EFB) on hazelnut (Corylus spp.) trees. It is a minor disease on its native host, the American hazelnut (C. americana), but is highly destru...

    Authors: Alanna B. Cohen, Guohong Cai, Dana C. Price, Thomas J. Molnar, Ning Zhang and Bradley I. Hillman
    Citation: BMC Genomics 2024 25:347
  9. The yak (Bos grunniens) is a large ruminant species that lives in high-altitude regions and exhibits excellent adaptation to the plateau environments. To further understand the genetic characteristics and adaptiv...

    Authors: Hui Jiang, Zhi-Xin Chai, Xiao-Ying Chen, Cheng-Fu Zhang, Yong Zhu, Qiu-Mei Ji and Jin-Wei Xin
    Citation: BMC Genomics 2024 25:346
  10. High-mobility group B1 (HMGB1) is both a DNA binding nuclear factor modulating transcription and a crucial cytokine that mediates the response to both infectious and noninfectious inflammation such as autoimmu...

    Authors: Meimei Liao, Jiarui Cao, Wen Chen, Mengwei Wang, Zhihui Jin, Jia Ye, Yijun Ren, Yaxun Wei, Yaqiang Xue, Dong Chen, Yi Zhang and Sen Chen
    Citation: BMC Genomics 2024 25:345
  11. Genome-wide DNA demethylation occurs in mammalian primordial germ cells (PGCs) as part of the epigenetic reprogramming important for gametogenesis and resetting the epigenetic information for totipotency. Dppa3 (...

    Authors: Keisuke Toriyama, Wan Kin Au Yeung, Azusa Inoue, Kazuki Kurimoto, Yukihiro Yabuta, Mitinori Saitou, Toshinobu Nakamura, Toru Nakano and Hiroyuki Sasaki
    Citation: BMC Genomics 2024 25:344
  12. Parasitic nematodes, significant pathogens for humans, animals, and plants, depend on diverse organ systems for intra-host survival. Understanding the cellular diversity and molecular variations underlying the...

    Authors: Rahul Tyagi, Bruce A Rosa, Amanda Swain, Maxim N Artyomov, Douglas P Jasmer and Makedonka Mitreva
    Citation: BMC Genomics 2024 25:341
  13. The popularity of Muscovy ducks is attributed not only to their conformation traits but also to their slightly higher content of breast and leg meat, as well as their stronger-tasting meat compared to that of ...

    Authors: Jiangnan Huang, Xiaolan Xiong, Weihong Zhang, Xiaolian Chen, Yue Wei, Haiqin Li, Jinfang Xie, Qipeng Wei and Quanyong Zhou
    Citation: BMC Genomics 2024 25:340
  14. Cetaceans, having experienced prolonged adaptation to aquatic environments, have undergone evolutionary changes in their respiratory systems. This process of evolution has resulted in the emergence of distinct...

    Authors: Boxiong Guo, Yixuan Sun, Yuehua Wang, Ya Zhang, Yu Zheng, Shixia Xu, Guang Yang and Wenhua Ren
    Citation: BMC Genomics 2024 25:339
  15. Due to rising costs, water shortages, and labour shortages, farmers across the globe now prefer a direct seeding approach. However, submergence stress remains a major bottleneck limiting the success of this ap...

    Authors: Kelvin Dodzi Aloryi, Nnaemeka Emmanuel Okpala, Hong Guo, Benjamin Karikari, Aduragbemi Amo, Semiu Folaniyi Bello, Dinesh Kumar Saini, Selorm Akaba and Xiaohai Tian
    Citation: BMC Genomics 2024 25:338
  16. Larval settlement and metamorphosis represent critical events in the life history of marine benthic animals. Myoinhibitory peptide (MIP) plays a pivotal role in larval settlement of marine invertebrates. Howev...

    Authors: Zhi Yang, Long Zhang, Wenqing Zhang, Xinhua Tian, Wenyuan Lai, Dawei Lin, Yuxin Feng, Wenwen Jiang, Zhengrui Zhang and Zhifeng Zhang
    Citation: BMC Genomics 2024 25:337
  17. The Asian tiger mosquito, Aedes albopictus, is a global invasive species, notorious for its role in transmitting dangerous human arboviruses such as dengue and Chikungunya. Although hematophagous behavior is repu...

    Authors: Yuhua Deng, Shuyi Ren, Qiong Liu, Dan Zhou, Caimei Zhong, Yabin Jin, Lihua Xie, Jinbao Gu and Chuanle Xiao
    Citation: BMC Genomics 2024 25:336
  18. Mimosa bimucronata originates from tropical America and exhibits distinctive leaf movement characterized by a relative slow speed. Additionally, this species possesses the ability to fix nitrogen. Despite these i...

    Authors: Haifeng Jia, Jishan Lin, Zhicong Lin, Yibin Wang, Liangwei Xu, Wenjie Ding and Ray Ming
    Citation: BMC Genomics 2024 25:334
  19. The closed poultry houses integrated with a longitudinal water curtain cooling system (LWCCS) are widely used in modern poultry production. This study showed the variations in environmental conditions in close...

    Authors: Qian Hu, Tao Zhang, Hua He, Fajun Pu, Rongping Zhang, Liang Li, Jiwei Hu, Lili Bai, Chunchun Han, Jiwen Wang and Hehe Liu
    Citation: BMC Genomics 2024 25:333
  20. The current study aimed to evaluate Y chromosome haplotypes obtained from 1353 unrelated Iranian males using the AmpFlSTRTM YfilerTM kit; 1353 out of the 1353 identified haplotypes were unique. The haplotype d...

    Authors: Mohammad Reza Eskandarion, Arash Alipour Tabrizi, Reza Shirkoohi, Reza Raoofian, Masume Naji, Reza Pazhoomand, Hooman Salari, Bahram Samadirad, Alireza Sabouri, Mostafa Montazer Zohour, Hadi Namazi, Pegah Farhadi, Zohre Baratieh, Minoo Sayyari, Maliheh Dadgarmoghaddam, Esmat Safdarian…
    Citation: BMC Genomics 2024 25:332
  21. The pig (Sus Scrofa) is one of the oldest domesticated livestock species that has undergone extensive improvement through modern breeding. European breeds have advantages in lean meat development and highly-produ...

    Authors: Heng Du, Zhen Liu, Shi-Yu Lu, Li Jiang, Lei Zhou and Jian-Feng Liu
    Citation: BMC Genomics 2024 25:331
  22. Plant growth and development can be significantly impacted by drought stress. Plants will adjust the synthesis and accumulation of secondary metabolites to improve survival in times of water constraint. Simult...

    Authors: Shuo Wang, XueLei Zhao, Chang Li, Jing Dong, JiaCheng Ma, YueHong Long and ZhaoBin Xing
    Citation: BMC Genomics 2024 25:330
  23. Previously, a novel multiplex system of 64 loci was constructed based on capillary electrophoresis platform, including 59 autosomal insertion/deletions (A-InDels), two Y-chromosome InDels, two mini short tande...

    Authors: Meiming Cai, Fanzhang Lei, Yanfang Liu, Xi Wang, Hongdan Wang, Weibing Xie, Zi Yang, Shangwu Yang and Bofeng Zhu
    Citation: BMC Genomics 2024 25:329
  24. Food security is important for the ever-growing global population. Soybean, Glycine max (L.) Merr., is cultivated worldwide providing a key source of food, protein and oil. Hence, it is imperative to maintain or ...

    Authors: Chade Li, Wenyan Nong, Delbert Almerick T. Boncan, Wai Lok So, Ho Yin Yip, Thomas Swale, Qi Jia, Ignacio G. Vicentin, Gyuhwa Chung, William G. Bendena, Jacky C. K. Ngo, Ting Fung Chan, Hon-Ming Lam and Jerome H. L. Hui
    Citation: BMC Genomics 2024 25:327
  25. Jilin white goose is an excellent local breed in China, with a high annual egg production and laying eggs mainly from February to July each year. The testis, as the only organ that can produce sperm, can affec...

    Authors: Yupu Song, Jingyun Ma, Qiuyuan Liu, Ichraf Mabrouk, Yuxuan Zhou, Jin Yu, Fengshuo Liu, Jingbo Wang, Zhiye Yu, Jingtao Hu and Yongfeng Sun
    Citation: BMC Genomics 2024 25:326
  26. Non-coding RNA is a key epigenetic regulation factor during skeletal muscle development and postnatal growth, and miR-542-3p was reported to be conserved and highly expressed in the skeletal muscle among diffe...

    Authors: Dandan Li, Yongqi Yue, Xinxin Feng, Weibing Lv, Yilin Fan, Peiran Sha, Te Zhao, Yaqiu Lin, Xianrong Xiong, Jian Li and Yan Xiong
    Citation: BMC Genomics 2024 25:325
  27. Lactococcus lactis is widely applied by the dairy industry for the fermentation of milk into products such as cheese. Adaptation of L. lactis to the dairy environment often depends on functions encoded by mobile...

    Authors: Simon van der Els, Reshtrie Sheombarsing, Thijn van Kempen, Michiel Wels, Jos Boekhorst, Peter A. Bron and Michiel Kleerebezem
    Citation: BMC Genomics 2024 25:324
  28. Cow milk fat is an essential indicator for evaluating and measuring milk quality and cow performance. Growing research has identified the molecular functions of circular RNAs (circRNAs) necessary for mammary g...

    Authors: Xiaofang Feng, Lijia Tong, Lina Ma, Tong Mu, Baojun Yu, Ruoshuang Ma, Jiwei Li, Chuanchuan Wang, Juan Zhang and Yaling Gu
    Citation: BMC Genomics 2024 25:323
  29. Primulina hunanensis, a troglobitic plant within the Primulina genus of Gesneriaceae family, exhibits robust resilience to arid conditions and holds great horticultural potential as an ornamental plant. The work ...

    Authors: Lingling Chen, Xiang Dong, Hang Huang, Haixia Xu, Peninah Cheptoo Rono, Xiuzhen Cai and Guangwan Hu
    Citation: BMC Genomics 2024 25:322
  30. Congenital infection caused by vertical transmission of microsporidia N. bombycis can result in severe economic losses in the silkworm-rearing industry. Whole-transcriptome analyses have revealed non-coding RNAs ...

    Authors: Zigang Shen, Zhuojun Ke, Qiong Yang, Samson Teweldeberhan Ghebremichael, Tangxin Li, Tian Li, Jie Chen, Xianzhi Meng, Heng Xiang, Chunfeng Li, Zeyang Zhou, Guoqing Pan and Ping Chen
    Citation: BMC Genomics 2024 25:321
  31. Stigma exsertion is an essential agricultural trait that can promote cross-pollination to improve hybrid seed production efficiency. However, the molecular mechanism controlling stigma exsertion remains unknown.

    Authors: Xiaoquan Zhang, Juxu Li, Xuexia Xing, Hongchen Li, Songtao Zhang, Jianbo Chang, Fengjie Wei, Yongfeng Zhang, Jinhui Huang, Xuelin Zhang and Zhaojun Wang
    Citation: BMC Genomics 2024 25:320
  32. Gastric cancer (GC) is one of the most common malignant tumors worldwide. Nevertheless, GC still lacks effective diagnosed and monitoring method and treating targets. This study used multi omics data to explor...

    Authors: Jianing Yan, Xuan Yu, Qier Li, Min Miao and Yongfu Shao
    Citation: BMC Genomics 2024 25:319
  33. Detecting structural variations (SVs) at the population level using next-generation sequencing (NGS) requires substantial computational resources and processing time. Here, we compared the performances of 11 S...

    Authors: Soobok Joe, Jong-Lyul Park, Jun Kim, Sangok Kim, Ji-Hwan Park, Min-Kyung Yeo, Dongyoon Lee, Jin Ok Yang and Seon-Young Kim
    Citation: BMC Genomics 2024 25:318
  34. The growth-regulating factor-interacting factor (GIF) gene family plays a vital role in regulating plant growth and development, particularly in controlling leaf, seed, and root meristem homeostasis. However, the...

    Authors: Yuqi Yang, Jianhao Sun, Chen Qiu, Peipei Jiao, Houling Wang, Zhihua Wu and Zhijun Li
    Citation: BMC Genomics 2024 25:317
  35. Alfalfa is a perennial forage crop of high importance, but its cultivation is often affected by drought stress. Currently, the investigation of drought-related small RNAs is a popular research topic to uncover...

    Authors: Bochuang Wei, Yizhen Wang, Qian Ruan, Xiaolin Zhu, Xian Wang, Tianjie Wang, Ying Zhao and Xiaohong Wei
    Citation: BMC Genomics 2024 25:316
  36. Transcriptome-wide survey divulged a total of 181 ABC transporters in G. glabra which were phylogenetically classified into six subfamilies. Protein–Protein interactions revealed nine putative GgABCBs (-B6, -B14,...

    Authors: Ritu Devi, Pooja Goyal, Bhawna Verma, Shahnawaz Hussain, Fariha Chowdhary, Palak Arora and Suphla Gupta
    Citation: BMC Genomics 2024 25:315
  37. Apoptosis is involved (directly and indirectly) in several physiological processes including tissue remodeling during the development, the turnover of immune cells, and a defense against harmful stimuli. The d...

    Authors: Yanfei Cao, Linxiang Xu, Xinwei Xiong and Xiao Liu
    Citation: BMC Genomics 2024 25:314
  38. Effective vector control is key to malaria prevention. However, this is now compromised by increased insecticide resistance due to continued reliance on insecticide-based control interventions. In Kenya, we ha...

    Authors: Diana Omoke, Lucy Mackenzie Impoinvil, Dieunel Derilus, Stephen Okeyo, Helga Saizonou, Nicola Mulder, Nsa Dada, Audrey Lenhart, Luc Djogbénou and Eric Ochomo
    Citation: BMC Genomics 2024 25:313
  39. Diabetic cardiomyopathy (DCM) is becoming a very well-known clinical entity and leads to increased heart failure in diabetic patients. Long non-coding RNAs (LncRNAs) play an important role in the pathogenesis ...

    Authors: Mengnan Zhao, Ting Wang, Xiaoning Cai, Guizhi Li, Na Li and Hong Zhou
    Citation: BMC Genomics 2024 25:312
  40. The Argentine stem weevil (ASW, Listronotus bonariensis) is a significant pasture pest in Aotearoa New Zealand, primarily controlled by the parasitoid biocontrol agent Microctonus hyperodae. Despite providing eff...

    Authors: Sarah N. Inwood, Thomas W. R. Harrop, Morgan W. Shields, Stephen L. Goldson and Peter K. Dearden
    Citation: BMC Genomics 2024 25:311
  41. Sequencing variable regions of the 16S rRNA gene (≃300 bp) with Illumina technology is commonly used to study the composition of human microbiota. Unfortunately, short reads are unable to differentiate between...

    Authors: Elena Buetas, Marta Jordán-López, Andrés López-Roldán, Giuseppe D’Auria, Llucia Martínez-Priego, Griselda De Marco, Miguel Carda-Diéguez and Alex Mira
    Citation: BMC Genomics 2024 25:310
  42. Incubation behaviour, an instinct for natural breeding in poultry, is strictly controlled by the central nervous system and multiple neuroendocrine hormones and neurotransmitters, and is closely associated wit...

    Authors: Zhi Chen, Di Wen, Yan Zhang, Jiaying Chen, Fengqian Pan, Wen Zhang, Shuangshuang Zhou, Fen Wang and Ren Mu
    Citation: BMC Genomics 2024 25:309
  43. Flowering at the right time is a very important factor affecting the stable annual yield of longan. However, a lack of knowledge of the regulatory mechanism and key genes of longan flowering restricts healthy ...

    Authors: Dengwei Jue, Zhexin Li, Wenlin Zhang, Jianmin Tang, Ting Xie, Xuelian Sang and Qigao Guo
    Citation: BMC Genomics 2024 25:308
  44. Poplar anthracnose, which is one of the most important tree diseases, is primarily caused by Colletotrichum gloeosporioides, which has been detected in poplar plantations in China and is responsible for serious e...

    Authors: Fei Xing, Linxuan Zhang, Wei Ge, Haixia Fan, Chengming Tian and Fanli Meng
    Citation: BMC Genomics 2024 25:306

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